Lentilactobacillus buchneri subsp. silagei CD034: LBUCD034_1488
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Entry
LBUCD034_1488 CDS
T02244
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lbn
Lentilactobacillus buchneri subsp. silagei CD034
Pathway
lbn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LBUCD034_1488 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbn03019
]
LBUCD034_1488 (groEL)
03110 Chaperones and folding catalysts [BR:
lbn03110
]
LBUCD034_1488 (groEL)
03029 Mitochondrial biogenesis [BR:
lbn03029
]
LBUCD034_1488 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lbn04147
]
LBUCD034_1488 (groEL)
Enzymes [BR:
lbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LBUCD034_1488 (groEL)
Messenger RNA biogenesis [BR:
lbn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LBUCD034_1488 (groEL)
Chaperones and folding catalysts [BR:
lbn03110
]
Heat shock proteins
HSP60 / Chaperonin
LBUCD034_1488 (groEL)
Mitochondrial biogenesis [BR:
lbn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LBUCD034_1488 (groEL)
Exosome [BR:
lbn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LBUCD034_1488 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
LBUCD034_1488 (groEL)
Exosomal proteins of breast cancer cells
LBUCD034_1488 (groEL)
Exosomal proteins of colorectal cancer cells
LBUCD034_1488 (groEL)
Exosomal proteins of bladder cancer cells
LBUCD034_1488 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
PhaC_N
Motif
Other DBs
NCBI-ProteinID:
AFS00517
UniProt:
J9W4F5
LinkDB
All DBs
Position
complement(1479961..1481583)
Genome browser
AA seq
540 aa
AA seq
DB search
MAKQVKFSEDARSAMLKGVDKLADTVKATIGPKGRNVVLEQSAGTPTITNDGVTIAKSIE
LPDHFENMGAKLVSEVASKTNDVAGDGTTTATVLTQAIVNEGMKNVTAGANPVGIRRGIE
KATKAAVDALHKMSHDVKTKDDIAQIASISSANTEVGKLIADAMEKVGHDGVITIEESRG
VDTSLDVVEGMQFDRGYMSQYMVTDNDKMEANLDNPYILVTDKKITNIQDILPLLQKIVE
QGRSLLIIADDIGGEALPTLVLNKMRGTFNVVAVKAPGFGDRRKDQLQDIAILTGATLIT
DDLGLNLKDATLEQLGQANKVNVTKDSTTIVDGSGSNDEIANRVAEIKTQIEKTTSDFDR
DKLKERLAKLSGGVAVVRVGAATETELKEKKYRIEDALNATRAAVEEGFVPGGGTALINV
IPEIAKLDAEAGGDEETGIRIVLRALEEPVRQIAENAGVEGSVIVEKLKDEKPGIGYNAA
NGKFEDMISDGIVDPTKVTRSALQNAASVSALLLTTEAVVADEPKKDAPAAPMPQPGMGM
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacaagtaaagttttctgaagatgcccgtagcgcaatgctcaagggtgttgat
aaattagcagatacggttaaggcaacgattggacctaaaggccgcaacgttgttttggaa
caaagtgccgggacaccgacaattaccaatgatggtgttaccatcgccaaatcaattgaa
ttaccggatcattttgaaaacatgggcgccaaattggtttctgaagttgcttcaaagacc
aatgatgttgctggtgacggaacaaccactgccacagttttaactcaagcaattgtcaat
gaaggtatgaagaacgtcactgccggtgccaacccagttggaattcgtcgtggtattgaa
aaggctactaaagccgctgttgatgcccttcacaaaatgtcgcatgatgttaagaccaaa
gacgatattgcacaaattgcttcaatttcatctgctaacaccgaagttggcaaattgatt
gccgatgcaatggaaaaagttggccatgatggtgttattaccattgaagagtcacgtggt
gttgataccagcttggacgttgttgaaggaatgcaatttgatcgcggctacatgtcacaa
tacatggttaccgacaatgacaagatggaagccaacttggacaatccttacatcttggta
actgataagaagatcaccaacattcaagacattttgccattactgcaaaagattgttgaa
caaggtcgttcactcttgatcattgctgatgacattggcggtgaagctctgccaactctt
gtattgaacaagatgagaggaacattcaacgtcgttgctgttaaggcacctggatttggt
gatcgtcgtaaggatcaactccaagatatcgccattttgaccggtgcaaccttgattacc
gatgaccttggtttgaacttgaaggatgcaacccttgaacaacttggtcaagctaacaaa
gttaacgttaccaaggattcaaccacgattgtcgacggttccggttcaaacgatgaaatt
gccaaccgagttgctgaaattaagacccaaatcgaaaagacgacttcagactttgaccgt
gacaagttaaaggaacgtcttgccaagttatcaggtggggttgccgttgttcgtgtcggt
gccgctaccgaaactgaattgaaagaaaagaagtatcgcattgaagatgccttgaatgcg
acccgtgctgccgttgaagaaggattcgttcctggtggtggaactgccttgattaacgtc
atcccagaaatcgccaagttggatgccgaagctggcggtgatgaagagactggtattcgc
attgttcttcgtgcccttgaagaacctgttcgtcaaatcgctgaaaatgccggtgttgaa
ggctcagtgattgttgaaaagctcaaggacgaaaagcctggaattggctacaatgctgcc
aatggtaaatttgaagatatgatcagtgatggaatcgttgatcctaccaaagttacccgt
tcagcacttcaaaatgctgcttctgtttcagccttgttgttgaccaccgaagctgttgtt
gctgatgagcctaagaaagacgcaccagctgctccaatgccacaacctggtatgggcatg
taa
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