Lentilactobacillus buchneri subsp. silagei CD034: LBUCD034_1525
Help
Entry
LBUCD034_1525 CDS
T02244
Symbol
trmH
Name
(GenBank) RNA methyltransferase, TrmH family
KO
K03218
23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:
2.1.1.185
]
Organism
lbn
Lentilactobacillus buchneri subsp. silagei CD034
Brite
KEGG Orthology (KO) [BR:
lbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbn03009
]
LBUCD034_1525 (trmH)
Enzymes [BR:
lbn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.185 23S rRNA (guanosine2251-2'-O)-methyltransferase
LBUCD034_1525 (trmH)
Ribosome biogenesis [BR:
lbn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LBUCD034_1525 (trmH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
DUF2207_C
Motif
Other DBs
NCBI-ProteinID:
AFS00553
UniProt:
J9W216
LinkDB
All DBs
Position
complement(1513350..1514150)
Genome browser
AA seq
266 aa
AA seq
DB search
MKNDNRSQDHRSDDSQDQPEEFVIGRHPVVAALKSENPVNKLFIQSGIKDDDNIISEIMK
LAHKKRLVISKVPKQKLDKLSNNQNHQGVVLSIAAFKYATIDDLFANAKKQAVEPFFVIL
DNIEDPHNLGSIIRTADAAGVSGIIIPKHRAVGLTATVSKTSAGAIERVPVARVTNLSAT
IKELKQRGMWVFGTDVSGTDYRRWDAKGSIAVIIGNEGKGISPLLKKQVDEMLTIPMVGD
IQSLNASVAASILIYQGFNSRHPLSK
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatgataatcgtagtcaagatcatcgcagcgatgacagtcaggatcagcccgaa
gagtttgtgattggcagacaccccgtggttgcggcgttaaagagtgaaaacccggttaac
aaactgtttatccagtcaggaatcaaagatgacgacaatattatctctgaaatcatgaaa
ttggcgcataaaaagcggctggtgatttcaaaggttccaaagcaaaagctggacaagctt
tccaataaccaaaatcatcaaggggtggtattatcaattgcagcctttaagtatgcaacg
attgacgatctatttgccaatgccaagaagcaagcggttgaaccgttctttgtgattctg
gacaatatcgaagatcctcataatttagggtcaattattcggactgccgatgctgccggg
gtgtctggcattatcattcccaagcaccgagccgtgggattaacggccacggtttccaaa
acttcagccggagccattgaacgggttccggttgcccgcgtgaccaatttgtcggcaacc
attaaagaattaaaacaacgcggaatgtgggtttttgggactgatgtttccggaactgat
taccgtcgttgggatgccaaaggctcaatcgccgttattatcggcaacgagggtaaggga
atttccccgctgttgaagaaacaggtcgacgaaatgttgaccattccaatggtgggagat
attcaaagcctgaatgcgagcgttgcagccagcattttgatttatcagggctttaattcc
cgccacccattatcaaaataa
DBGET
integrated database retrieval system
