Lentilactobacillus buchneri subsp. silagei CD034: LBUCD034_1530
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Entry
LBUCD034_1530 CDS
T02244
Symbol
radA
Name
(GenBank) DNA repair protein radA
KO
K04485
DNA repair protein RadA/Sms
Organism
lbn
Lentilactobacillus buchneri subsp. silagei CD034
Brite
KEGG Orthology (KO) [BR:
lbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbn03400
]
LBUCD034_1530 (radA)
DNA repair and recombination proteins [BR:
lbn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LBUCD034_1530 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
DUF7125
RecA_N
Lon_C
ABC_tran
AAA_22
GvpD_P-loop
AAA_16
AAA_24
AAA_14
KdpD
nSTAND3
SLFN-g3_helicase
NTPase_1
AAA
AAA_18
nSTAND_NTPase5
Rad51
AAA_19
NPHP3_N
AAA_5
ATPase_2
divDNAB
RUBY_RBDX
DUF7129
KTI12
HypA
Motif
Other DBs
NCBI-ProteinID:
AFS00558
UniProt:
J9W221
LinkDB
All DBs
Position
complement(1518879..1520252)
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AA seq
457 aa
AA seq
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MAKVKTQFVCQNCGYISPRYLGRCPNCNEWNTLVEETITPKNSTMATQSLRRNGIHDNKP
ESINKVEFHKDIRFKTDMEELNRVLGGGVVPGSLILIGGDPGIGKSTLMLQVSGQLSKSG
KILYVSGEESASQIKMRADRLGVNGENLYVYPETDMDVIKDTINEMKPDAVVIDSVQTMQ
IPELQSATGSVAQIREVTADLMNIAKGQGITVFVVGHVTKGGAIAGPKILEHMVDTVLYF
EGDLHHSYRILRTVKNRFGSTNELGVFEMRTDGLREVKNPSEIFLEERLKDATGSAIVVS
MEGTRPILVEIQALVTASVFGNAQRTATGLDRNRVSLIMAVLEKRAGLMLQNQDAYLKAA
GGVKLDEPAIDLAIAVSIASSYKNRGTSPTECYVGELGLTGEVRRVTRIEQRVAEAQKLG
FKRVLVPANNLQGWNPPTGISVVGVSTLAQALKLALG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaagttaaaacccaatttgtatgtcagaactgcggctacatttccccaagatat
ttgggacgttgcccgaactgtaatgaatggaacaccttggttgaagaaaccatcacccca
aaaaatagcacaatggcaacccaaagccttcgcagaaacggtatccatgacaataagccc
gaatcaattaataaagttgagttccataaggacattcgtttcaaaaccgacatggaagaa
cttaaccgggtcctcggcggaggcgtggttccaggatcgctgatcttaattggcggagac
cccggcattggtaaatcaactttgatgctgcaggtttccggtcagctcagtaaatccggt
aagattctgtatgtttcaggtgaagagagtgcttcccaaatcaaaatgcgggctgatcgg
cttggtgtcaatggggaaaatctttatgtctaccccgaaaccgatatggatgtcatcaaa
gataccattaacgagatgaaaccagatgctgtcgtcatcgactcggttcaaaccatgcag
attccagagctgcagtcagcgactggatcggtggcacagattcgagaagtgaccgccgat
ttaatgaacattgccaagggtcagggaatcaccgtattcgtcgttggccacgtgacgaaa
ggtggtgcgattgccgggccgaagattttggagcatatggtcgacaccgtgctgtatttt
gaaggtgacctgcaccattcctaccggattttgcggactgtcaaaaaccgttttggctcg
accaatgaactgggcgtttttgaaatgcggactgacggcctgagggaggttaagaatcct
tcagaaatcttcttggaagaacggctgaaagacgctaccgggtcggccattgttgtttcc
atggagggaaccagaccaatcctggttgaaattcaggctctggtaacggcctcggttttc
ggtaatgcgcaacgaactgccactgggctggaccgcaatcgggtgtcgttgattatggct
gttttggaaaagcgggcgggattgatgctgcagaatcaggatgcctacttaaaggcggcc
gggggcgttaaactggatgagccggccattgatttggcaattgcggtcagcatcgcttca
tcctacaaaaaccgcggcaccagcccgacggagtgttatgtcggcgaacttgggctaacc
ggtgaagttcgccgcgttacccgaattgagcagcgggttgccgaggcccaaaaactcggt
ttcaaacgggtcttggttccagccaacaatcttcagggctggaatccaccaactggcatt
tcggtagttggggtttcaacccttgctcaagctttaaagcttgcacttggttaa
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