Lentilactobacillus buchneri subsp. silagei CD034: LBUCD034_1670
Help
Entry
LBUCD034_1670 CDS
T02244
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lbn
Lentilactobacillus buchneri subsp. silagei CD034
Pathway
lbn03420
Nucleotide excision repair
lbn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LBUCD034_1670
03430 Mismatch repair
LBUCD034_1670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbn03400
]
LBUCD034_1670
Enzymes [BR:
lbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LBUCD034_1670
DNA repair and recombination proteins [BR:
lbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LBUCD034_1670
MMR (mismatch excision repair)
Other MMR factors
LBUCD034_1670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C_2
UvrD_C
AAA_30
DEAD
ThylakoidFormat
NACHT
SLFN-g3_helicase
AAA_16
Pallilysin
Motif
Other DBs
NCBI-ProteinID:
AFS00686
UniProt:
J9W969
LinkDB
All DBs
Position
1654658..1656967
Genome browser
AA seq
769 aa
AA seq
DB search
MENNEKQIEQSRVDKVVTKIDQKIISTDDELNRAHAETKKVQQTYSDNTSVNYFEVDDRI
ETSAELQQQRGLVSRLTENESILKNQLSTLKDLKKSPYFGRIDIQDDDEDQTEKLYIGIA
SFENEDGEFLVYDWRAPISSVYYNGTLGEVAYDTPMGRQQTNLKKKRQFQIVDGQIRNMF
DTNETVGDEMLQSALGEQNDEYMQNIVATIQHEQNDIIRDTTSNLLVVQGVAGSGKTSAI
LQRIAFLLYHSRDTLEADQIILFSPNKLFSHYISEVLPSLGERNMRQVTFDEFIDNRLKG
LNVQSLFERYETDGDLTEQQRLVRGFKESAKFMDELQEYCDKLQPAQIFFSDIIFNESTF
FSKQEIQDIFDSFPKAAKVYDRFLHTKNELIKRLKRRIDDETKADWVNDEIDQMSNEKYH
DLLAGKELGEFQNEDAERFFIARKIVSARLRVVYDAIFNDNFFDAYLQYADFLKKVDLPQ
NIETPQWLQSVDEFNHSIEFHAIKLDDCAPLLYMRDYMSNSGQNNTMKYLFVDEMQDYSV
AQLKYLRYAFPKTKWTLLGDSEQALFKDVEQPKEILDKLNAAFHVRRSRLISLMRSYRST
LPITNFAKSILPNGDDIEAFTRPGDIPELVLTSDFNDGINQLQKVIADQRKQYATVAVLT
KNMTEAQQVYERLHALGDVTLLQDADRTLPKGILVLPIYLAKGLEFDSVIAWDTSEKNYS
DESLLGTLYTIITRAMHHLTLISLGDVTPLISDESLTDRKIKIEKKIRK
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaataatgaaaagcaaatcgaacagtcacgtgtggacaaagtggtgaccaaaatt
gaccagaaaatcatcagcacggatgacgaacttaaccgtgcccacgcagaaaccaaaaag
gttcagcagacttattccgacaatacctcggttaactattttgaggtggatgatcgaatt
gaaaccagtgccgaactccagcagcagcggggtttggtttctcgtttaaccgaaaatgaa
agcatcttaaaaaatcagctttcaactttgaaagatctcaaaaaatccccgtactttggc
cggatcgatatccaagacgatgacgaggatcaaaccgaaaagctgtatatcggcattgct
tcatttgaaaatgaagacggtgagtttctggtgtacgactggcgggcacctatctccagt
gtttactataacggcactctgggtgaagtcgcctacgatactccaatgggccgacagcaa
accaatttaaaaaagaagcgtcagttccaaattgtcgacggtcaaatccgcaacatgttt
gacaccaacgaaacggttggcgatgaaatgcttcaaagtgctttgggtgagcaaaacgac
gaatacatgcaaaatatcgtcgccaccattcagcacgaacaaaacgatattattagagat
accaccagtaatctgctggtggttcaaggggttgccggatcggggaaaacctccgccatt
ttacagcgaattgcctttttgctgtatcatagccgcgatacgttggaagccgatcaaatt
attttgttctctccaaataaattattcagccactatatttccgaagtcctccccagcttg
ggtgaacgcaatatgcgccaggtcacctttgatgaatttattgataaccgactaaagggc
ctaaacgtccaaagtttgtttgaacgatacgaaactgatggtgacttgaccgaacagcag
cgactggttcgcggcttcaaagaatctgccaaatttatggacgaactccaggaatactgt
gataagctccagccagcccaaatcttcttcagtgacatcatttttaacgaatcaaccttc
tttagcaaacaggaaattcaagacattttcgacagttttcccaaagcagccaaagtttat
gatcgcttcttacacaccaagaatgaattgatcaagcgactcaaacgccggatcgacgac
gaaaccaaggctgattgggtcaacgacgaaatcgatcaaatgagtaatgagaagtaccac
gatctcttggccggcaaagaactgggtgagttccaaaatgaagatgccgagcgcttcttc
attgcccgaaaaatcgtcagtgcccgcctgcgggtggtctacgatgcgatctttaacgac
aacttcttcgatgcctacctgcagtacgccgacttcttgaaaaaagtcgacctgccgcaa
aacattgaaacgccccagtggctgcagtccgttgatgagtttaatcattcaattgaattt
catgccatcaaattggacgattgtgcgccgttgctttacatgcgcgactatatgtccaac
agcggacagaacaacactatgaaatacctgtttgtcgatgaaatgcaggattattcagtg
gctcaactcaaatacctgcgctacgcctttccaaagacaaagtggacactattgggcgac
agtgagcaggcactgttcaaagacgttgaacagccaaaagaaattcttgataaattaaac
gccgctttccatgtgcgccggtcccgactaatcagtttgatgcggtcgtatcgctcaacg
ctgccgattaccaactttgccaaatccattttgcctaacggagatgacattgaggcgttc
acccgccccggcgacattccggaattggttttgacatccgacttcaatgacggcatcaac
cagctgcaaaaagtgattgccgaccaacgcaagcaatacgccaccgttgctgttttaacc
aaaaatatgactgaggcccagcaggtctatgaacgactgcatgctttaggagatgtcacg
ttattgcaagatgcggaccgaacattgccaaagggcattttagtgctgccaatctatttg
gcaaagggcttggaatttgattccgtgatcgcttgggatacctctgagaagaactattcc
gatgaaagtttgcttggaaccctctacacgattatcacccgggctatgcaccacttaacc
ttgatcagtctgggcgacgtaaccccgctgatttccgatgagagtttaaccgatcgcaag
attaaaatcgaaaaaaagattcggaagtaa
DBGET
integrated database retrieval system
