Lentilactobacillus buchneri subsp. silagei CD034: LBUCD034_1751
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Entry
LBUCD034_1751 CDS
T02244
Symbol
trmA
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lbn
Lentilactobacillus buchneri subsp. silagei CD034
Brite
KEGG Orthology (KO) [BR:
lbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbn03009
]
LBUCD034_1751 (trmA)
Enzymes [BR:
lbn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
LBUCD034_1751 (trmA)
Ribosome biogenesis [BR:
lbn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LBUCD034_1751 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_15
TRM5-TYW2_MTfase
Methyltransf_25
Cons_hypoth95
MTS
PrmA
Methyltransf_11
RrnaAD
N6_N4_Mtase
TRM
Methyltransf_4
DOT1
Methyltransf_23
PCMT
Methyltransf_12
Methyltransf_32
CMAS
Motif
Other DBs
NCBI-ProteinID:
AFS00756
UniProt:
J9W9F1
LinkDB
All DBs
Position
complement(1738411..1739781)
Genome browser
AA seq
456 aa
AA seq
DB search
MKKMVPVEKNQNYDVDITDLTYQGLGVAKIDDFPIFIENALPTENVTMKVIKVKKNFAFG
RVVKINQKSKDRVELVDKAYTQTGIAPLQHLKYDAQLKFKQHQIQVDFDKMKLDVTVNPT
IGMDDPTHYRNKAQIPVRSINGQLQTGFYRKHSHDLVPIEDFYIQDPKIDEAVVVVRDIL
RKFRVQPYDEQTNKGVVRNIMVRRGHYSHEMMIVLITRTEKLPSSSEIVAEIEQSLPEVK
SIVQNVNPEKTNALMGKKNKVLAGKSTIEDTLLGLKFDISASSFYQVNPVQTEKLYDLAT
KKADLSADDVVIDAYCGIGTISLSMARVAKQVYGVEIVPEAVEDAKKNAKLNNLTNVHFV
TGKAETQMAKWQEDGLKPDVISVDPPRKGLDASLIDSVVKMQPKRVVYVSCNPATLARDV
KLFTEQGYQVNQPIQPVDQFPQTVHVESITVLERGH
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatggtaccagttgaaaagaaccagaactacgacgttgatattactgattta
acgtatcaaggtctgggagttgccaagattgatgatttcccaatttttattgaaaatgct
cttccaaccgaaaacgtgaccatgaaggttattaaggttaaaaagaactttgccttcgga
cgggtagttaagatcaatcaaaagagtaaagaccgggttgaattggtggataaagcatac
acccaaaccggaattgcgccgcttcaacatctaaaatatgatgcgcaattaaaattcaag
caacatcaaattcaagttgacttcgataaaatgaagcttgatgtgactgttaatcccacg
atcggcatggacgatcccacccactatcgtaacaaggctcaaattcctgtccgctcaatt
aatgggcagcttcaaaccggtttttatcggaaacactctcatgacttggtgccgattgaa
gacttctatattcaagatcccaagattgatgaggcagtggtggttgttcgtgacattttg
cgcaagttcagagttcaaccctatgatgaacaaactaacaaaggcgttgtccgcaacatc
atggtccgccgcggccattactctcatgaaatgatgatcgttttgattaccagaacagag
aaattgccaagcagtagcgagattgtggctgaaattgaacagtcactgcccgaagtgaag
agtatcgtccaaaatgtcaatcctgaaaaaacgaatgccttgatgggcaagaaaaataaa
gttttggctggtaagagtaccattgaggataccctgcttggactgaagtttgatatttca
gccagctcattttatcaagtcaaccctgtgcagacggaaaaattatatgatttggcgacc
aagaaagctgacttgtcggctgacgatgttgtgatcgatgcctattgtggaatcgggacg
atttcgctttccatggcccgcgtggccaagcaggtttatggggttgaaattgtccctgaa
gctgttgaagatgccaagaagaacgccaagcttaacaatttaaccaatgtgcacttcgtt
accggcaaagccgagacgcaaatggccaaatggcaggaagacggcttaaagccggatgtc
atttctgttgatccgccgcgtaaaggccttgatgccagtttgattgacagcgtggtgaaa
atgcagcccaagcgagtggtctatgtgtcatgtaatccggcaactttggcacgagatgtt
aaattatttactgagcaaggttatcaggttaatcaaccgattcaacccgttgaccaattc
ccacagaccgtgcatgttgaatcaattaccgtcttggaacgtggtcattaa
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