Lentilactobacillus buchneri subsp. silagei CD034: LBUCD034_1768
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Entry
LBUCD034_1768 CDS
T02244
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lbn
Lentilactobacillus buchneri subsp. silagei CD034
Brite
KEGG Orthology (KO) [BR:
lbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbn03016
]
LBUCD034_1768 (truA)
Enzymes [BR:
lbn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LBUCD034_1768 (truA)
Transfer RNA biogenesis [BR:
lbn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LBUCD034_1768 (truA)
Prokaryotic type
LBUCD034_1768 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
EcoRII-N
DUF2344
Rota_Capsid_VP6
Motif
Other DBs
NCBI-ProteinID:
AFS00772
UniProt:
J9W558
LinkDB
All DBs
Position
complement(1754359..1755045)
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AA seq
228 aa
AA seq
DB search
MAKNPDPPIVVYGSGRTDAGVHALGQVVHFDFPFDLPTKAIYRGLNSLLPLDMEIKKAEK
VSNTFHARYDVSGKRYVYRLDLGEFKDPFKRNYTGNWRFPIDIERVQTAMNDFVGEHDFS
SFVASGSTARSNVRTIYEANAILDKSANEIRLEFYGNGFLYNMVRIMVGVVVEIGSQMRP
EHDILRLYEVKDRDQARRTMPASGLYLKKVYYEGEDPKHPTKLPKRQR
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaatcccgaccccccaattgtcgtctacggatctggcaggacagatgccggt
gtccatgccctcggacaagttgtccattttgatttcccgtttgatttgccaaccaaggca
atttatcggggactaaacagtctcctgccgcttgacatggagattaaaaaagcggaaaag
gtatccaatactttccatgcccgctacgatgtgtccggtaaacggtatgtttatcggctg
gatttaggcgaatttaaggatccgttcaaacggaattataccggcaattggcgttttccc
attgatattgaacgggttcaaacggcaatgaatgatttcgttggtgaacatgacttttcc
agttttgtcgcttcggggtcgactgcacgatccaatgttcgaacgatttatgaagctaat
gcgattttggacaaatcagccaacgaaattcggcttgagttctatggcaatggtttcctc
tataacatggttcgaatcatggttggggtagttgttgagattgggtctcaaatgcgccct
gagcacgatatattgcgcttatacgaggtgaaagatcgtgaccaggcccgacgaaccatg
ccggcatccggtttgtacttaaagaaagtctattatgagggtgaagatccgaagcacccc
acgaaattgccaaaacgacaacgataa
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