| Entry |
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| Symbol |
rpoB2
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
lbn Lentilactobacillus buchneri subsp. silagei CD034
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:lbn00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LBUCD034_1806 (rpoB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:lbn03021]
LBUCD034_1806 (rpoB2)
03400 DNA repair and recombination proteins [BR:lbn03400]
LBUCD034_1806 (rpoB2)
Enzymes [BR:lbn01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LBUCD034_1806 (rpoB2)
Transcription machinery [BR:lbn03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LBUCD034_1806 (rpoB2)
DNA repair and recombination proteins [BR:lbn03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LBUCD034_1806 (rpoB2)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(1776243..1779905)
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| AA seq |
1220 aa
MVDVNKFESMQIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFDERIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGIPSRMGLVLDM
SPRALEEIIYFASYVVTEPGNTPMEKKQLLSEREYREKKQEYGPRFSAQIGAEAIKTLLE
DVDVEKEVTELKDELKNATGQKRTRAVRRLDILEAFVQSGNELSWMVMDAIPVIPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVAGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIDVGPHLKMNQMGLPVP
MAMELFKPFIMKELVGRNLASNIKNAKRKIERQDDDVFSVLEDVIKEHPVLLNRAPTLHR
LGIQAFEPVLVSGKSMRLHPLVCEAYNADFDGDQMAIHVPLSDEAQAESRLLMLAAGHIL
APKDGKPVVTPSQDMVIGNYYLTMEEAGREGEGMIFNSPDEAQLAFKNGIVHWHTRVGIK
ASAYPKKTFTKDQLGKILVTSVGKIVFNEILPEDFPFINEPSETNLNGYVDDKFFLEPGE
DIHEHLKNAKLILPFKKGFLSDIIAEVYKIYKVTETSFLLDRMKDLGYNESTKSGLTVGI
TDITQLPDKQEIIDGAHKKVDMVTKQFRRGLITDHERYERVIGIWNDAKDDIQKRLLENQ
DPQNPIFMMSDSGARGNISNFTQLAGMRGLMAAPNGEIMELPITSNFREGLTVLEMFIST
HGARKGMTDTALKTANSGYLTRRLVDVAQDVIVREKDCGTDRGLTISAITEGNEMIEPLY
DRIVGRYAHKTVKNPKTGDVIVPANTMITEDQATKIDDLGIKEVTIRSAFTCNTIHGVCE
KCYGRNMATGDEVEVGEAVGTVAAQSIGEPGTQLTMRNFHTGGVAGNADITQGLPRVQEI
FEARNPKGKAEISEVTGTVESIEENPAERTKEITIKGESDTRTYTVPITARMRVAEGDYI
HRGSALNEGSVDPKELLKVRDVLSTENYLLHEVQKVYRMQGVEVADKHVEIMIRQMLRKV
RIMDPGDTDVLPGTLMDINDFKISNGDTVVNGGIPATARPVLLGITKAALETNSFLSAAS
FQETTRVLTDAAIRGKNDPLVGLKENVIIGKLIPAGTGMPDYRGIKPEEIGSSSTDGVYS
ISQLEEKMKAEDANKSKTTK |
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| NT seq |
3663 nt +upstreamnt +downstreamnt
gtggtcgatgttaataaattcgaaagtatgcagattggactagcctctcctgataagatt
cgtagttggtcatatggtgaagttaaaaagccagaaaccattaactaccgaactttaaaa
ccagaaaaagatggtttgtttgatgaacggattttcggtcctaccaaagactgggaatgt
gcttgtggtaagtacaagcggatccgttataagggaatcgtttgtgaccgttgtggagtt
gaagttacccgttcaaaggttcgtcgtgaacggatgggccatattgaactggcagctcca
gttactcacatctggtacttcaaaggaatcccaagtcgaatgggtcttgtcttggacatg
agccctcgtgcacttgaagaaatcatttacttcgcttcatacgttgttaccgaaccaggt
aacacaccaatggaaaagaagcagttgctttcagaacgtgaataccgcgaaaagaagcag
gaatatggtcctcggttctcagctcaaattggtgccgaagccatcaagacactgcttgaa
gatgtggatgttgaaaaagaagttaccgaattaaaagatgaattgaagaatgcaaccggt
caaaagcggacccgtgccgttcgtcgactcgatattttggaagctttcgtccaatccgga
aatgaactttcatggatggtaatggatgcaatcccagttatcccacctgacttacgacca
atggttcaacttgaaggtggccgtttcgccacttctgatttgaatgatttgtaccgtcgg
gtaattaaccgtaataatcgtttgaaacgattgctggacctgaacgcacctggaattatc
gttcaaaacgaaaaacggatgcttcaagaagccgttgatgctttgattgataacggtcgt
cgtggccgtccagttgccggaccaggtaaccgcccattgaagtcactttctcacatgctt
aaaggtaagcagggacgattccgtcagaacttgcttggtaagcgtgttgattattctggc
cgttccgttatcgatgttggccctcatttgaagatgaaccaaatgggattaccagttcca
atggcaatggaattattcaagccatttattatgaaggaattggttggtcgcaatttggca
tccaacattaagaacgccaagcgcaaaattgaacgccaagatgacgatgttttcagtgtc
ttggaagatgttatcaaggaacacccagttctgttgaaccgggcccctacacttcaccgt
ttgggaattcaagcttttgaacccgtactggtaagtggtaagtcgatgcgtcttcatcca
ttggtttgtgaagcctacaatgccgattttgatggtgaccaaatggctatccatgttccg
ttgtctgatgaagcccaagctgaatcacgtttgctgatgctagctgccggccatattctg
gcacctaaggatgggaagccagttgttaccccatctcaagatatggttatcggtaactat
tacctgaccatggaggaagccggccgcgaaggtgagggaatgatctttaactcacctgat
gaagcacaattggcatttaagaatggaatcgttcactggcacacacgtgttggaatcaag
gcttccgcatatccaaagaagacctttacaaaggatcaacttggaaaaattttggtaacc
tccgttggtaagattgtcttcaatgagattttgccagaagattttccattcattaacgaa
ccttcagaaaccaatttgaacggttatgttgatgacaaattcttccttgaaccaggtgag
gacattcatgagcatctgaagaatgccaaattaatcctgccattcaagaaaggcttctta
agtgatatcattgccgaagtttacaagatctacaaagtgactgaaacttcattcttgttg
gatagaatgaaggatctgggttacaacgagtcaaccaagtctggtttgaccgttggaatt
accgacatcacacagttgcctgataagcaagaaattatcgacggcgcccataaaaaggta
gatatggttaccaagcagttccgtcgtggtttgattaccgaccatgaacgttatgaacga
gttattggtatttggaatgatgccaaggatgacattcaaaagcgtctgttggaaaaccaa
gatccacagaaccctatctttatgatgagtgattccggtgctcgtggtaacatttcaaac
tttactcagttggcaggtatgcgtggcttgatggctgctcctaacggtgaaatcatggaa
ttaccaattacttccaacttccgtgagggtctgactgttttggaaatgttcatttcaacc
catggggctcgtaaaggaatgaccgatactgcccttaagactgccaactcaggttacttg
acccgtcgtttggttgatgttgctcaagatgtcatcgttcgtgaaaaggactgtgggacc
gatcgtggcctgactatcagtgcaattactgaaggtaacgaaatgatcgaaccattgtat
gatcgaattgttggccgttatgctcacaaaaccgttaagaaccctaagactggcgatgtg
attgttcctgcaaacaccatgatcactgaggatcaggctactaagattgatgaccttgga
atcaaagaagtaacgattcgttcagcattcacttgcaacaccattcatggtgtttgtgag
aaatgttatggtcgtaacatggctactggtgatgaggttgaagttggtgaagcagttggt
actgttgctgctcaatcaatcggtgaacctggtacccagttgacaatgcgtaacttccat
actggtggtgttgctggtaacgccgatattacccaaggacttcctcgtgttcaagaaatc
tttgaagcacgtaatccaaaaggtaaagctgagatcagtgaagttactggtacagttgag
tcaattgaagaaaatcctgctgaaagaacaaaagaaattaccattaaaggtgaatctgat
actcgaacttacaccgttccgatcacagctcgaatgagagtcgctgaaggtgactacatt
caccgtggttcagctctcaatgaaggttctgttgatcctaaggaattgttgaaggttaga
gatgttctctcaactgaaaactacctgcttcatgaagttcaaaaagtttaccggatgcaa
ggtgtggaagtggctgataagcatgtggaaatcatgattcgtcagatgcttcgtaaggtt
cgtatcatggatcctggtgacactgatgtattgcctggtactttgatggatatcaatgac
ttcaagataagtaacggtgacacggttgttaatggtggaattccggcaactgcccgtcct
gtcttacttggtattaccaaggctgctcttgaaacaaatagtttcttgtcagccgcatca
ttccaggaaaccacgcgtgttcttactgatgccgcaattcgtggtaagaatgatccactg
gttggtttgaaggaaaatgttatcattggtaaattaatccctgcaggtactggaatgcca
gattaccggggaattaagcctgaagaaattggtagttcatcaactgatggtgtttactca
attagccagcttgaagaaaaaatgaaagctgaagatgctaacaagagcaagacgaccaaa
taa |
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