Lentilactobacillus buchneri subsp. silagei CD034: LBUCD034_1819
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Entry
LBUCD034_1819 CDS
T02244
Symbol
serS
Name
(GenBank) Seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
lbn
Lentilactobacillus buchneri subsp. silagei CD034
Pathway
lbn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lbn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LBUCD034_1819 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lbn01007
]
LBUCD034_1819 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbn03016
]
LBUCD034_1819 (serS)
Enzymes [BR:
lbn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
LBUCD034_1819 (serS)
Amino acid related enzymes [BR:
lbn01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
LBUCD034_1819 (serS)
Transfer RNA biogenesis [BR:
lbn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LBUCD034_1819 (serS)
Prokaryotic type
LBUCD034_1819 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF4047
BORCS8
FmiP_Thoc5
FlgK_D1
zf-Mss51
DUF7389
Motif
Other DBs
NCBI-ProteinID:
AFS00813
UniProt:
J9W2U3
LinkDB
All DBs
Position
complement(1788482..1789765)
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AA seq
427 aa
AA seq
DB search
MLDIKKIRKDPDFTKEKLATRGIKPETIDELVGYDAKRRDLIVESESLKAKRNAVSDQIS
QKKRNKEDATEAINQMKQVGQRIKELDEQLRQVEEDEHNLAAHLPNIPHDDVPVSLTEEG
SVELRKIGQIPSFDFEPKHHWEIGENLGILDFERAAKVSGSRFVYYIGDGALLERAVYNF
YLDQNTAAGYTEVIPPYMVNNDSMYGTGQFPKFLENKSGYEIQDSDLTLIPTAEVPLVNY
YRNEVIPTEKLPVSVTALSPAFRSEAGSAGRDTKGLIRLHQFNKVEMVKFTKPEDSWKAL
EEITHQAEVNLQKLGLAYHVITLTTSDMSFTAAMTHDLEVWFPAQDKYREISSCSNCTDF
QARRAHIQYRDDEGKLHFVHTLNGSGLAVGRTVAAILENYQNEDGTVTIPEVLRPYMHGM
TKIEKQN
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgttagatattaagaaaatcagaaaagatccagattttaccaaagaaaagctcgctacg
cggggaatcaagcccgaaaccattgatgaattagtgggctacgatgccaaacgtcgggat
ctgatcgttgaatcagagtcacttaaagcaaaacggaacgccgtttctgaccagatttca
caaaagaagcgcaataaagaggatgcaacagaggccatcaaccaaatgaaacaggtgggc
caacggattaaggaacttgacgagcaattgcggcaagttgaggaagatgaacacaatttg
gctgcccatctaccaaatattccacatgatgatgtcccggtgtcactcacagaagaagga
tccgttgagcttcgtaagattgggcagatcccgtcatttgattttgaaccaaaacaccat
tgggaaatcggtgaaaatcttggcattcttgactttgaacgggctgccaaagtgtccggc
agccgatttgtttactatattggcgacggggctttattggagcgggccgtttacaacttc
tacctcgaccaaaataccgctgccggttataccgaagtaattccaccttacatggttaat
aacgattcaatgtatggcaccgggcaatttccaaaatttttggagaacaaatccggctat
gagattcaggacagtgatttaaccctgattccaactgccgaagttccattggttaactat
tatcgcaatgaagttattccgacagaaaagctgccggtatcggttacggccttgtcgcca
gcattccgatcggaagcaggaagtgcgggccgtgataccaaggggctgattcgattacac
caatttaacaaggttgaaatggtgaaatttaccaagcccgaagactcgtggaaggcactg
gaagagattacccaccaagcagaagttaacctgcaaaaacttgggttggcttaccacgtt
attacattgacgaccagtgatatgagtttcacagccgctatgacacacgacctggaagtt
tggttcccagcccaggataagtaccgggaaatctccagctgttcaaactgtacagacttc
caagcacgccgagcacacatccagtatcgggatgatgaagggaaacttcactttgttcat
actttaaatggttctggactggcagtcggcagaacggtggccgccattctggaaaattac
cagaatgaagatggcactgtcacgatcccagaagtattacggccatatatgcacggcatg
actaaaattgaaaagcaaaactag
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