Lentilactobacillus buchneri subsp. silagei CD034: LBUCD034_2292
Help
Entry
LBUCD034_2292 CDS
T02244
Symbol
rexB
Name
(GenBank) ATP-dependent nuclease, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lbn
Lentilactobacillus buchneri subsp. silagei CD034
Brite
KEGG Orthology (KO) [BR:
lbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbn03400
]
LBUCD034_2292 (rexB)
Enzymes [BR:
lbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LBUCD034_2292 (rexB)
DNA repair and recombination proteins [BR:
lbn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LBUCD034_2292 (rexB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AFS01262
UniProt:
J9W6Q2
LinkDB
All DBs
Position
complement(2316144..2319704)
Genome browser
AA seq
1186 aa
AA seq
DB search
MTLQFVLGQAGVDHQSKMIDILRQQKSDNPHDQFFYLVPNHIKFESEVSILKQLGDANQM
TTAQSDVQVLSFTRLAWFFLRNTPEYQKQRISSAGISMLLYQIIVDNADQLVLFDHEIHN
PGFIDQIATQIAEMQAGNVLPEDLLEMLQRPDSTITNDLRDKLHDFSIIYSQYVKRISEN
YFDSHTVLNLLSSKLQDIDLSGYHFYIDGFSKFTAQECGLVQTLINQSASVTVSLTLDRP
YPTELPEQPNIFFQPAKLFHQLYRFAADNRVPYLKAVMADQPRVDEDMQKLEAYWITSSS
LGTHQLPDQISPESVQIYQADNLYSELDQVATKIHQMVATGKYRYSDFLILTRHLDAYQN
ILEPVFTTQQIPYFKDIQQSMADHPLVELLAALFDIYDPNRARNYRYDDVMRFLKSELVL
PMIDGKPMAIDDYRQAVSLTDNLVLKNDYADTRWTQKADWQYVWLPDSDEEQTTTKITDQ
DREISRKINIIRHLVRDLLPSFYKQFFKAKTNQEAAQILYQFLVDAGVVDRLQDWRDAAT
DEGDINRSNQIEQVWRTFCSLLDECVQILGDKPFVPGDFWSLIYAGFEGADYSQIPSTLD
QVSVSESGMVQMNDYRVTFMIGANDDNMPDRLVNENLFGDDDINQLQSNLSDDQYLNDPA
EVQMAFEPYLNYLAFMTASDKLIFTYTNKLNDESAVKLSPYVSRIQHFFNLKIVNNPAIP
DDEHDVMPYVGTKRGTLHHLIQVIQNHFDIHQDLSAGWAVILQYLQRDPEVNRQTAKLLK
SINYTNVPQSLAPEIITDLYGSELNISISQLETFYKNPYEYFLKYGLKLQERPKFELSTA
STGTFYHDAMDRIIKQIHAQNIDLASLSDQDVSDLVKETVDRIINDPQNFDYVVLTSSNR
MHYISMQLAATIQQMIRALRDQQKLTPMRPQNTELIFGQPNQKQALNGLSFDLADDHQVK
VRGRIDRIDSMTTKDKRYFGIVDYKSSDRKFDFNAAYDGTSMQLLTYLDVLKHNLERLNP
DDKEVALAGALYLHIYNAVFKPEDLQKVTFDDALLKKHRYNGILVDESGLIDHLDEELDS
GYSPIYPIRKTAKGYTGKKSLINPLQLDAFLTHTEKLIVDAAEKIFAGDVRLWPFKQGQT
TGMQFTPYKSIMNFDPILPGNQYRPVNSDSIDDIKKKLGEEKSDGI
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
gtgacccttcagtttgtcttaggtcaagcaggtgtcgatcatcaatcgaaaatgatcgat
attctgcgccagcaaaaatcagacaatccacacgaccaatttttctatttggttccaaac
cacattaagtttgaatcagaagtcagtattttaaaacaacttggcgacgccaatcaaatg
accactgctcaaagtgatgttcaggtgttatccttcacccgattagcgtggttctttctg
cgcaacacaccggaatatcaaaagcagcggatcagcagtgccggtatcagtatgctgctg
taccaaattattgttgataacgccgatcaattggtgctctttgaccacgaaattcataat
cctgggtttattgatcagattgctacccagattgccgagatgcaggccggaaatgtcttg
cctgaagatcttttggaaatgctgcagcggcctgacagcacgattaccaatgatctgcgc
gataaactccacgatttttcaattatttattcccaatatgtcaaacgcatttcagagaac
tattttgacagccacaccgtcttgaacctgctgagcagcaaactgcaggacattgatttg
agtggctatcacttctatattgacggtttttcaaaatttactgcccaggaatgcggcttg
gtgcaaaccttgatcaatcaatccgcttcggtgacggtgtcattgacgttggaccggcca
tacccaactgaactgccggaacagccgaatattttctttcagccggctaaattgttccat
cagctctatcgatttgccgctgacaaccgggtgccttatttaaaggccgtcatggctgac
cagccgcgggttgatgaagatatgcaaaaattagaggcgtactggatcacgtccagcagc
ctcgggactcatcaactgcctgaccaaatttccccggagtcggttcaaatttatcaagct
gacaacctttactctgaactggaccaagttgccacgaagattcatcaaatggttgccacc
ggtaaatatcggtactcggattttctcattttgacccgccatttagacgcatatcaaaat
attttagagccggtgtttaccacccagcagatcccctatttcaaggatattcagcagtca
atggctgaccatccgctggtggaattattagcagcgttatttgatatctacgatccaaat
cgagcccgcaattaccgttacgatgacgtgatgcggtttttaaaatctgaattagtccta
ccgatgattgacggcaagccgatggcaatcgatgattatcgtcaagcggtgtctttgacc
gataatttggtgctgaaaaacgattacgccgacacccgctggacacaaaaggctgattgg
cagtacgtttggctgccggacagcgacgaagaacagacgaccacaaagatcactgaccaa
gatcgggaaatttcccgcaaaatcaatatcattcgccacctggtgcgagacttattaccc
agtttttataaacaatttttcaaagctaaaaccaaccaggaagctgctcaaattctctac
cagtttctagtggatgccggcgttgttgaccggctccaggactggcgggatgcggcaaca
gacgagggcgatatcaatcgttccaaccaaatcgaacaggtttggcggacattttgttct
ctactggacgaatgcgtccaaattctgggggacaaaccgtttgtgcccggcgatttttgg
tcactcatctatgccggctttgaaggagcggactattcacaaattccgtccacgctggat
caagtgagcgtctctgaaagcggcatggttcagatgaatgattatcgagtcacgttcatg
atcggcgccaacgatgacaacatgccggatcgcctagttaatgaaaatctctttggcgat
gacgacatcaaccaactccaaagcaatctcagtgacgatcagtatttaaatgatcccgcg
gaagtccaaatggcttttgaaccatacttgaactatttggccttcatgaccgcttcggat
aaactcatttttacctacaccaacaaattaaacgacgaatccgctgtgaaactttcacct
tatgtttcacggattcagcatttctttaacctcaaaatcgtcaacaacccggcgatcccc
gatgatgagcacgacgtgatgccatacgtgggcaccaagcgcgggacacttcaccatttg
attcaagtcattcaaaatcactttgatattcatcaggacttgagtgccggctgggcagtg
attttgcagtacctgcagcgggatccggaagtcaaccggcagacggccaagctgcttaag
agcattaattacacaaatgtgccgcagtcattggctcctgaaatcattacagatctatac
gggtcagaactaaatatttcgatttctcaactggaaaccttctataagaacccctatgaa
tatttcctcaaatatgggttaaaactccaggaacgaccgaagtttgagctgtcgacggca
tcgactgggaccttttatcatgacgccatggaccggattattaagcagattcatgcccaa
aacattgatttggccagcttatccgatcaagatgtgagcgacctcgtcaaagaaaccgtc
gaccgaatcatcaatgatccccaaaactttgactacgttgtgctgaccagttccaatcgg
atgcattatatttccatgcaattagccgcgaccatccagcagatgatccgagccttgcgt
gaccaacagaaactgacgccaatgcggccgcaaaataccgaactgatttttggccagccc
aatcaaaagcaggccctcaatggtctgagctttgatttggctgatgatcatcaggttaaa
gttcggggcagaattgaccgaattgattcgatgaccaccaaggacaaacgctacttcggg
atcgttgactacaagtcctctgaccgcaaatttgatttcaatgcagcttacgacgggacg
tcaatgcagctgttgacgtatctggatgttttaaaacacaatctggaacgacttaatccc
gacgataaggaagtcgctttggccggcgcgttgtacttgcacatttataatgccgtcttc
aaacccgaggaccttcaaaaggtgacctttgacgatgccttgttaaagaagcatcgctat
aacggcattttggttgacgagtccggcttgattgatcatttggatgaggagctggatagc
ggctactcaccgatttacccaattagaaagaccgccaaaggctacactggtaaaaaatca
ttgattaatccattgcaattggatgcgtttctcacccacactgagaaacttattgtcgat
gcggcagaaaagatttttgccggtgacgttcgactgtggccgtttaagcagggtcaaacc
accgggatgcagtttaccccgtacaaatcaatcatgaactttgacccaattttgccgggt
aaccagtaccggccggttaacagtgattcgattgacgatattaagaaaaaattaggggag
gaaaagtccgatggcatttga
DBGET
integrated database retrieval system
