Lentilactobacillus buchneri subsp. silagei CD034: LBUCD034_2457
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Entry
LBUCD034_2457 CDS
T02244
Symbol
trmE
Name
(GenBank) GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
lbn
Lentilactobacillus buchneri subsp. silagei CD034
Brite
KEGG Orthology (KO) [BR:
lbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbn03016
]
LBUCD034_2457 (trmE)
Transfer RNA biogenesis [BR:
lbn03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
LBUCD034_2457 (trmE)
Prokaryotic type
Methyltransferases
LBUCD034_2457 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
RsgA_GTPase
GTP_EFTU
Ras
MMR_HSR1_Xtn
Roc
Csa3_N
Motif
Other DBs
NCBI-ProteinID:
AFS01419
UniProt:
J9W539
LinkDB
All DBs
Position
complement(2490691..2492085)
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AA seq
464 aa
AA seq
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MVLTTTEFDTIAAISTPPGEGGISIIRISGEEALDVAKKLYRGKDLDKVASNTINYGHII
DPDTNEEVDEVMLSVMRAPHTYTEEDIVEINCHGGIVATNRILQLALSHGARMAEPGEFT
KRAFLNGRIDLSQSEAVMDLIEAKTDRSMKAAINQLDGNLSHLIKHLRQDILDVLAQVEV
NIDYPEYDDVETMTSKLLREKATDVHARIVQLLKTAKQGKILREGLATSIIGRPNVGKSS
LLNNLLHEDKAIVTDVPGTTRDVLEEYVNVRGVPLKLVDTAGIRDTTDKVEKIGVDRSRK
AINSADLVLLVLNASEPLTDEDKKLLSATQDKQRIIILNKTDLPTKIDQDQIKSLADGQN
VISTSAIKADGLTQLEELIAKMFFDEGIESSQNDIMVTNARHIGLLNQAKQALEDVVKGL
DDGMPVDLVQIDMTRCWDFLGEITGDSYQDELIDQLFSQFCLGK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggttttaacaacaacagaatttgatacgattgcagcgatttcaacaccacctggtgag
ggcgggatttcgattatccgcattagtggtgaagaagcacttgatgttgcaaaaaagctc
tatcgtggtaaagaccttgataaagttgccagcaacaccattaattatggccacatcatt
gatccggataccaacgaagaggtcgatgaagtaatgctctccgtgatgagagcccctcac
acttatactgaagaggatattgttgaaattaactgtcatggtgggattgttgccaccaat
cgaattcttcagttggcactgagtcacggtgctaggatggccgagcctggggaatttacc
aaacgggcatttctcaatgggcgaattgatttgtcacagtctgaagccgtcatggatctg
attgaagccaaaaccgaccgctcaatgaaagccgcgattaatcaattggatggtaatcta
tcgcatttgattaaacatttacgccaagatattctcgacgtgcttgcccaagtagaagtc
aacattgactatcctgagtacgatgatgttgaaaccatgaccagtaaattgttacgggaa
aaggcgaccgatgtccatgcgcgaattgtgcaactgctgaagactgccaaacaaggcaag
atcttacgagaaggtttggccacttcgattattggtcggcccaacgtcggtaagtccagt
ttgttgaacaatttacttcatgaagacaaggcaatcgtgactgatgtgcccggtactacc
agagatgtccttgaagaatatgtcaacgtccgcggcgtgccgttaaaattggttgatacg
gccggaattcgcgatacgactgacaaagttgaaaaaatcggtgttgatcgttccagaaaa
gccattaatagtgccgatttggtgctgctggtgcttaacgccagtgagccattaaccgat
gaggacaaaaagttattgagtgccactcaagacaaacaacggattatcatcctcaataag
actgatttaccaaccaaaattgatcaagaccaaattaagtctttagctgacggccagaac
gttatttcgacttcagcgattaaggcagacgggttgacgcagctggaagaattgattgcc
aagatgttctttgatgaaggaattgaaagcagtcaaaacgacattatggtcaccaatgct
cgccacatcggtctgttaaatcaagccaaacaggctttggaagacgttgtcaaaggattg
gatgatggcatgccggttgatttggttcaaatcgacatgacccgctgctgggatttctta
ggtgagattaccggcgacagttaccaagatgagttaattgatcagttattcagtcaattc
tgtttaggaaaataa
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