Leptolyngbya boryana: LBWT_17230
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Entry
LBWT_17230 CDS
T04848
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03090
RNA polymerase sigma-B factor
Organism
lbo
Leptolyngbya boryana
Brite
KEGG Orthology (KO) [BR:
lbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbo03021
]
LBWT_17230
Transcription machinery [BR:
lbo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LBWT_17230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_r3
Sigma70_ECF
HTH_Tnp_ISL3
HTH_23
HTH_24
HTH_AsnC-type
HTH_38
HTH_Crp_2
LacI
HTH_3
HTH_17
HTH_30
KORA
HTH_8
HTH_50
HTH_10
UPF0122
TPM_phosphatase
KfrA_N
ApoC-I
AbiEi_4
HTH_11
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
BAS55817
LinkDB
All DBs
Position
complement(1837262..1838044)
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AA seq
260 aa
AA seq
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MATQSSLRSRGMELLVSYHQNPSVRLRNQLVQMNAGLVRKIAHRVSHQCAEPYEDLEQIG
YLGLIRAIERFNPNQGCAFSSFAVPYIRGEMLHFLRDRAGTVKIPRRWQQLNKEGQRVRE
QLMEAFGRQPSDEEIADVLKVSVNEWRESKLAAKNRLPLSLDATVCQQLDSPMTLGDTLP
DVRYQALQVLEEDRQQLQRALNQLEDKTRQAIEYVFLHDLSRKEVAEQIGVSPMTVTRRI
HRGIQQMVGLLHPQVMQSDP
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcaatcttctttacgctcccgtggaatggaactgttagtttcgtatcaccaa
aacccctcggtaagactgcgaaaccagttggtgcagatgaatgcaggtttagtgcggaaa
atcgctcatcgggtgagtcatcaatgtgcagaaccctatgaagacctcgaacagattgga
tatttagggctgattcgagcgatcgaacggtttaatcccaatcaaggatgcgcgttcagt
tcgttcgccgtaccgtatattcgaggcgaaatgcttcacttcttacgcgatcgtgctgga
accgtcaaaattccccgtcgctggcagcaattgaataaagaagggcaacgagtccgcgaa
caattaatggaagccttcggacggcaacccagtgacgaagagattgcagatgtattaaaa
gtgtcggtgaacgaatggcgcgagagcaaactggctgcaaagaaccgattaccgctgagt
ttagacgcaaccgtgtgtcagcagttagattctccgatgacattgggcgacaccttaccc
gatgtcagatatcaagccctccaagtgctcgaagaagaccgccagcaattacaacgcgcc
ttaaatcagcttgaagataagacccgccaagcgatcgaatatgtgttcttacatgattta
tcgcgtaaagaagtcgcagaacagattggagtcagcccgatgacggtgactcgccggatt
catcgcggaattcaacaaatggtcggattgctgcatcctcaagtgatgcagagcgatccc
taa
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