Leptolyngbya boryana: LBWT_18250
Help
Entry
LBWT_18250 CDS
T04848
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lbo
Leptolyngbya boryana
Pathway
lbo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lbo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LBWT_18250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbo03021
]
LBWT_18250
03400 DNA repair and recombination proteins [BR:
lbo03400
]
LBWT_18250
Enzymes [BR:
lbo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LBWT_18250
Transcription machinery [BR:
lbo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LBWT_18250
DNA repair and recombination proteins [BR:
lbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LBWT_18250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RNA_pol_L_2
HHH_2
Motif
Other DBs
NCBI-ProteinID:
BAS55916
LinkDB
All DBs
Position
1952461..1953399
Genome browser
AA seq
312 aa
AA seq
DB search
MAQFQVECIDTSTEEDQSQYSKFVLEPLERGQGTTVGNALRRVLLSNLEGAAVTAVRIAG
VTHEFATIPGVREDVLDILLNMKKLVFRTYSSQPQIGRLLVQGQSTVTAENFDLPSEVEL
VDPTQYIATLSPNATLEMEFKIEKGKGYRGAGKFTDDTALDFLQIDSVFMPVRKVQYSVE
DARQGGTAEKDRLIMEIWTNGSLTPQEALSQAANILVDLFNPLKDITFEPSDDDGMSDER
IENQIPIEELQLSVRAYNCLKRAQINSVADLLDYSQEDLLEIKNFGAKSAEEVVEALQQR
LGITLPQEKSKS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtggcacagtttcaggttgaatgtattgatacgagtactgaggaagaccaaagtcagtac
agcaagttcgtattagaaccgctagagcgaggacaaggaaccaccgttggcaacgcattg
cggcgggtgttactgtcgaacttagaaggcgctgccgtgactgctgtgagaattgcaggc
gtgacccatgaattcgcaacgattccaggcgttcgagaagacgttttggacatcttgctg
aacatgaaaaagctcgtctttagaacttactcgtctcagcctcagattggtcggctctta
gttcaaggtcagtccaccgtgacggctgaaaactttgacctgccttcagaagttgagctg
gttgacccgactcagtacattgcaaccctatctcctaacgcaacgttagagatggaattc
aaaattgagaaaggcaaaggctatcgcggcgctggcaaattcaccgatgatactgcactc
gactttttacagattgactctgtattcatgccggtgcgtaaggtgcaatacagcgttgaa
gatgctcgccaaggtggaacggctgaaaaagaccgtttgatcatggaaatctggacaaat
ggcagtttgactccgcaagaagcgctgagccaagccgcaaatatcctcgttgatctgttt
aatccgctgaaagacatcacattcgagccttcggatgatgatggcatgagcgatgagcgg
atcgaaaatcaaatcccgatcgaagaattgcagctatcagttcgggcatacaactgtctg
aaacgcgcgcaaatcaactcggtcgcggacttgctcgactacagccaagaagacctgctc
gaaatcaaaaattttggagccaagtctgccgaggaagtcgtcgaagccttacaacaacgg
ttggggatcaccctgccgcaagaaaaatctaaatcctaa
DBGET
integrated database retrieval system
