Leptolyngbya boryana: LBWT_24250
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Entry
LBWT_24250 CDS
T04848
Name
(GenBank) putative DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lbo
Leptolyngbya boryana
Brite
KEGG Orthology (KO) [BR:
lbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbo03032
]
LBWT_24250
03400 DNA repair and recombination proteins [BR:
lbo03400
]
LBWT_24250
Enzymes [BR:
lbo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LBWT_24250
DNA replication proteins [BR:
lbo03032
]
Prokaryotic type
DNA Topoisomerases
LBWT_24250
DNA repair and recombination proteins [BR:
lbo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LBWT_24250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
BAS56503
LinkDB
All DBs
Position
complement(2600339..2601409)
Genome browser
AA seq
356 aa
AA seq
DB search
MQLVVEELPSDPIESAEVVGLKYVTDEMPGITRKRSGKSFAYFDLNGDRIRDEKIIQRIN
SLAIPPAYKNVWICPLENGHLQATGRDAKGRKQYRYHPLWRAIRDQNKFSRMIAFSQALP
DIRRRLEKDLALPGLPKQKVLATVLKLMELTRIRVGNEEYAKTNNSYGLTTLQDDHVNVA
GSKIQFQFRGKSGVEHEIEVSDKRLAKVVKRCQDLPGQELFQYLDEHQQAQDITSSDVND
YLREVTGQDFTAKDFRTWAGTVLAASHLAEIGKFTSQTAAKKNITQAVKSVSAYLGNRPA
TCRKYYIHPNVLEAYLDESLHEVVAEYQSIVVDDRHALQCDELIVVALLEATQRKS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcaattagtcgttgaagagcttcccagtgacccgatcgagtcagccgaagtcgttggc
ttgaaatatgtcacagatgaaatgcctggaattacgagaaagcgatcggggaaaagcttt
gcatattttgatctgaatggcgatcgcattcgcgatgagaaaatcattcagcgcattaat
tctctagccattccgcctgcctataagaatgtctggatctgcccattggaaaatggacat
ttgcaggcaacgggacgagatgcaaaggggcgaaagcaatatcgatatcatccactttgg
cgagcaattcgcgatcaaaataagttttctcgcatgattgcatttagtcaggctttgcca
gacattcgacgacgattagagaaagatttagcattacccggattaccaaagcaaaaagta
ctcgctacagttctgaagttaatggagctaacccggattcgagtcggcaatgaggaatat
gcgaaaaccaataactcgtatgggttgaccacactacaagatgatcacgtgaatgtcgct
ggctcgaagattcagtttcaatttcgagggaaaagcggagttgaacatgagattgaagtg
agcgataagcgactcgcaaaagttgtaaaacgatgtcaggatttgccaggtcaagagctt
tttcaatatctagatgagcatcagcaagcccaagacattacttcaagtgatgtaaatgat
tatttgagagaagttacaggtcaagattttactgccaaagactttcggacttgggcaggc
acggttttagctgcttctcatctcgctgagattggcaaatttacgtctcaaactgcggcg
aagaagaacattacacaagccgttaagtcggtatctgcttacttaggcaatcgtcctgcg
acttgtcgaaaatactatattcacccaaatgtcttggaagcttatctagatgaatcgttg
catgaagttgtagcagaatatcaatcgatcgtagttgacgatcgacatgccctgcaatgt
gatgaattgattgttgtagcgctattagaagcaactcagcgaaagagctag
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