Leptolyngbya boryana: LBWT_28130
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Entry
LBWT_28130 CDS
T04848
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
lbo
Leptolyngbya boryana
Brite
KEGG Orthology (KO) [BR:
lbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbo03016
]
LBWT_28130
Enzymes [BR:
lbo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
LBWT_28130
Transfer RNA biogenesis [BR:
lbo03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
LBWT_28130
Prokaryotic type
tRNA splicing ligases
LBWT_28130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
BAS56886
LinkDB
All DBs
Position
complement(3001890..3003071)
Genome browser
AA seq
393 aa
AA seq
DB search
MPYEALTLSTRAPVLSWAGHELGHTEAQMARNVAALPFVFKHVALMPDVHLGKGALVGSV
VATQDAIIPAAIGVDIGCGMAAIKTPYNATQLEGKLKQIRLDIEAAIPTGFNENKEIEKT
VLNWQGWQQFKQLHPGVENLESKALKQMGSLGGGNHFIEVCLDAEEQVWLMLHSGSRHIG
NALAQRHIDTAKGLAKLAGEKLPDPDLAYFVRGTAEFAAYWHDLQWAQGYALYNRKVMLL
RFQRIVDRHLAGGKPMKPLLEVNCHHNYAERELHFGEEVYVTRKGAVRARETDYGIIPGS
MGAKSFIVKGKGNAHSYCSCSHGAGRLMSRNKAKTAFTLDDLIAQTAGVECRKDAGVLDE
IPGAYKPIEQVMANQSDLVEIVATLKQVVCVKG
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgccttacgaagctctcactttatcaactcgcgctccggtgctctcctgggcaggtcat
gagttaggacacaccgaagcacaaatggctcgaaatgttgctgctctcccctttgtgttc
aaacatgttgcgctgatgcctgatgtgcatttgggcaagggtgccttggttggatcggtt
gtggcaacccaagatgcaattatcccagccgcgatcggggtagacattggttgcggtatg
gcagcaattaaaactccatacaatgccacccagctagaaggaaagctcaaacagattcgt
ctcgacatcgaagcagcaatcccaactggattcaacgagaacaaagaaattgaaaagact
gtgctcaactggcaaggctggcaacagttcaagcagcttcaccctggcgtcgagaacctt
gaaagcaaagccctcaagcaaatgggttcgctaggtggaggaaaccactttatcgaggtt
tgcctggatgctgaggaacaagtgtggctgatgctgcattctggttcgcggcatattggg
aatgcgctagcacagcggcatattgatactgcaaaaggactagcaaagctagcaggggag
aagcttcctgatccagatttagcttactttgttcgcggcaccgctgagttcgctgcttat
tggcatgatttacagtgggcacaggggtatgcgctttacaaccggaaagtgatgctgctg
cgattccagcggattgtcgatcgacatttagcgggtggtaagccgatgaagcccttgctg
gaggtaaattgtcaccacaactatgccgaacgagaactacacttcggtgaagaagtatat
gtgactcgcaaaggcgcagtccgtgctcgcgaaaccgattacggcattattccaggcagc
atgggagcgaagtcgtttatcgtgaaaggaaagggcaatgctcacagctattgctcctgc
tctcacggtgcagggcggttaatgtcaagaaacaaagcaaagacggcgtttactctagat
gacttaatcgctcaaacggcgggagtcgaatgtcgcaaggatgctggcgtgctggatgaa
attccaggggcatacaagccgatcgagcaggtgatggcaaatcagagcgatcttgtcgag
atcgttgcgacgctgaagcaggtggtttgtgtcaaaggttga
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