Leptolyngbya boryana: LBWT_28560
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Entry
LBWT_28560 CDS
T04848
Name
(GenBank) ABC transporter
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
lbo
Leptolyngbya boryana
Pathway
lbo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lbo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LBWT_28560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lbo02000
]
LBWT_28560
Transporters [BR:
lbo02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LBWT_28560
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
SMC_N
AAA_22
AAA
AAA_28
RsgA_GTPase
ORC-CDC6-like
AAA_19
AAA_25
Rad17
ATPase_2
nSTAND_NTPase5
AAA_5
ABC_ATPase
NACHT
nSTAND3
AAA_16
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BAS56929
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Position
3047933..3049123
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AA seq
396 aa
AA seq
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MTVNSGRVSGAQNATQLTGNGIQQALASVAAGVGLRNVTKKYGSVTAVENITLDIPAGKY
CCLLGPSGCGKTTVLRMIAGHEEISSGEIFIGDRRVNDIPAAKRSTSMMFQSYALFPHKT
IWQNVDFGLKMQNVPEAERRARVGEILEMVGLSHTSDRKPTQLSGGQQQRIALARALVTR
PQVLMLDEPLSALDENLRVKMRTELRNIQKQFGLTFIQVTHHVEEAFALSDSVVVMNHGK
LDQVAAPQEIFSTPASQFVAKFMGDNNIFTGKVIQCAPDTDGTDLVELEIEGLGSLMAKG
YCVQPGQMAACSVRPDLMSIESSTSSAPTPYANRVSARITGIEMTGYVTRISLMAEATGQ
ELLYKVRTEDWNNETYAEGQLVTLRWSAENCVFLAH
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgaactctgggcgtgtctccggggcacagaacgccactcaactgactggaaat
ggtattcaacaagcgttagcgagtgttgccgcaggtgtcgggcttcgcaacgtcacgaaa
aagtatggcagtgttactgctgtcgaaaacattacactggacattcctgctggaaagtat
tgctgtttgctcggaccaagtggctgcggcaaaactacggtacttcgcatgattgcaggt
cacgaggagatttcgagcggcgagatttttattggcgatcgacgagtcaacgacattcct
gcggcaaaacgcagtacgtcaatgatgttccaaagctatgcgctgtttccacataagacc
atttggcagaatgtggactttgggctaaaaatgcagaatgttcctgaagcagagcgacga
gcgcgagtcggagaaatcttagaaatggtcgggctgagtcatactagcgatcgtaaaccg
actcaactcagcggcggtcaacaacagcgaattgcactggctcgagccttagtaactcgt
ccccaagtcttgatgttagatgagccgctgagcgcgctcgatgaaaacctgcgcgtgaag
atgcgaaccgagttgcgtaacattcaaaagcagttcggactcacttttattcaagtgacg
caccatgttgaagaagcatttgcgctttcagatagcgtggtcgtaatgaaccacggaaaa
ctcgatcaagtcgcagcaccgcaagagatctttagcactcctgcctcacagtttgtcgca
aagttcatgggcgacaataacatctttacgggcaaagtcattcaatgtgctccggacacc
gacggtacggatctcgtggaactggaaatcgaaggactgggatcattgatggcaaaaggc
tattgcgtccaaccaggacagatggcagcttgctcagtgcgtccggatttaatgtcgatc
gaatcctccacctcatctgctccaactccttacgcaaaccgagtttcagcccgaatcact
ggaatcgagatgactggatacgtcacgcgcatttcattgatggcagaagcaacgggacag
gaattgctttacaaagtccgaactgaagattggaacaatgagacatacgcagaggggcaa
ctggtcacgctccgttggtcagccgaaaactgtgtgtttctggctcattaa
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integrated database retrieval system
