Leptolyngbya boryana: LBWT_29560
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Entry
LBWT_29560 CDS
T04848
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
lbo
Leptolyngbya boryana
Pathway
lbo00900
Terpenoid backbone biosynthesis
lbo01100
Metabolic pathways
lbo01110
Biosynthesis of secondary metabolites
Module
lbo_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
lbo00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
LBWT_29560
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lbo01006
]
LBWT_29560
Enzymes [BR:
lbo01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
LBWT_29560
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
LBWT_29560
2.5.1.29 geranylgeranyl diphosphate synthase
LBWT_29560
Prenyltransferases [BR:
lbo01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
LBWT_29560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
S4
Motif
Other DBs
NCBI-ProteinID:
BAS57007
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All DBs
Position
3149917..3150840
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AA seq
307 aa
AA seq
DB search
MVATGTTQSNQAAQFDLKGYLSVKQQQVEAALDRAFPVVYPDKIYEAMRYSLFAGGKRLR
PVLCLAACDLFNGTPEMSIPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKFYGEA
VAILAGDGLLAYAFEHIVEETRNVSADRLLKVISRLGRAAGAAGLVGGQVVDLECEGVKD
ITLDTLNFIHTHKTAALLEASVVSGGILAGGSESDLQRLSRYSQAIGLAFQIVDDLLDIT
STQEELGKSIGKDANVEKATYPRLLGMEESKRQAQQLIEQAKAEVAGFGEQALPLMAIAD
YITARKN
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcgaccgggacaactcaatcgaatcaagcagcgcaattcgatttaaagggctat
ttatcagtaaaacagcaacaagttgaagctgctctcgatcgagcctttcccgtcgtctat
cccgataagatttatgaagcgatgcgctattccctcttcgcagggggaaaacggctgcgt
cctgtcctctgtctcgctgcctgtgatctgtttaatggcacaccagagatgtctattccg
actgcctgcgcgctggagatgatccacacgatgtcgctgattcacgacgatttgcctgcg
atggacaacgacgattaccgtcgcggcaaactcaccaatcacaaattttatggagaagcg
gttgcgattctagcgggtgacggattacttgcctatgcctttgagcacattgtggaagaa
actcgcaatgtcagcgccgatcgcttattaaaagtgatttctcgcctgggtcgtgcggcg
ggtgcggctggactcgttggcggtcaagtggtcgatctcgaatgcgaaggcgtaaaagac
attacccttgatacactgaactttattcacacgcacaagacggcggcattgcttgaagcc
tccgtcgtcagtggcggtattttggcaggcgggtcggagtctgatctgcaacgtctcagc
cgttactctcaagcgatcggattagcgttccagattgttgatgacttactcgatatcact
tcgactcaagaagaattgggtaagagcatcggcaaagatgcgaatgttgagaaagcgact
tacccccgcctcttaggcatggaagaatcgaaacgtcaggctcaacaactcattgagcag
gcgaaagctgaggtcgctggatttggtgaacaagcgctgccacttatggcgatcgctgat
tacatcactgcccgcaaaaactaa
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