Leptolyngbya boryana: LBWT_31350
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Entry
LBWT_31350 CDS
T04848
Name
(GenBank) DNA topoisomerase I, bacterial
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lbo
Leptolyngbya boryana
Brite
KEGG Orthology (KO) [BR:
lbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbo03032
]
LBWT_31350
03400 DNA repair and recombination proteins [BR:
lbo03400
]
LBWT_31350
Enzymes [BR:
lbo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LBWT_31350
DNA replication proteins [BR:
lbo03032
]
Prokaryotic type
DNA Topoisomerases
LBWT_31350
DNA repair and recombination proteins [BR:
lbo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LBWT_31350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Sec3-PIP2_bind
Toprim_4
DUF664
Motif
Other DBs
NCBI-ProteinID:
BAS57182
LinkDB
All DBs
Position
3343706..3346327
Genome browser
AA seq
873 aa
AA seq
DB search
MGHVRDLPQSTSDVPDSIKDKRVRELGVDVEAGFEPIYLVPKDKSKVVKTLKDALKEADE
LLLATDEDREGESISWHLLQLLKPKVPVKRMVFHEITEEAIHSAIENCRDIDVRLVRAQE
TRRILDRLVGYTLSPLLWKKIAYGLSAGRVQSVAVRLLVNRERQRRAFRKGAYWDLKALL
AIEADSRQEFEAKLVTLAGRKLATGADFDESTGQVAAGRNVVLLSEEEARALQARLDGKT
WTVSDLEERPVTRKPSPPFTTSTLQQESNRKLGLSARDTMRTAQSLYEQGYITYMRTDSV
HLSQQAIAATRSCVEEMYGAEYLSPSPRQYTTKSKGAQEAHEAIRPAGSTFRTPKQTGLK
DRELKLYDLIWKRTVATQMADARQTQVTAQIQVEDAGFRASGKRIDFPGFFRAYVEGSDD
PNAAIENQEIILPPMRAGDHPNCRNLEAIGHETQPPARFTEASLVKTLESEGIGRPSTYA
SIIGTITDERKGYAHLVGNTLVPTFTAFAVVDLLERHFPDIVDLRFTSKMEQTLDDIAAG
EVDWLPYLTQFYSGDQGLETQVKERDSNIDPKEARTIHLDDLGTKIRISRTGAYIESENG
NVNLPRDLPPADLHPAQVETLLKGPNKLGSHPETGEPIYVKLGPYGHYIQLGDKTEENPK
PKNVSVPPKIKPEEVTMEMALGLLTLPRTLGVHPETGRKIQASLGRFGPYIVHDLGKDED
GKPKKDYRSIKAPDDVVTITLERALELFAEPKAVRGKRAAAKPLRELGAHPNDGEPVNIY
EGPYGPYLKHGKVNASLPEGQTVEEITMDVAVEALAAKAGTKKTTRSKKKSETTTAKKTT
AKRATKTTTKKTTTKAAAAKKSTGTSKRVKTSE
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggtcatgtccgcgatttgccccaatcgaccagtgacgtgcctgattccattaaggac
aagcgtgttagagaactcggtgtcgatgttgaggcagggtttgagccaatttatctggtg
ccaaaagataaatcaaaggttgtgaagactttaaaggacgctttgaaagaagcggacgag
ttattgctggcgactgacgaagaccgcgagggtgaaagtattagctggcacttacttcag
ttgctcaagccgaaagtgcccgtgaagcgaatggtgtttcacgaaattacagaagaagcg
attcacagcgcgatcgagaactgccgcgatattgacgtaagactcgtgcgggcgcaagaa
accagacgaattctcgatcgcttagtcggttacacactgtcgccgctcttgtggaaaaag
atcgcctatggactttcggcaggacgggttcagtctgttgctgtgcgtctgctggtgaat
cgagagcggcaacgtcgtgcgttcagaaaaggcgcgtattgggatctcaaagcactgctc
gcgatcgaagctgattcccggcaagaatttgaagcaaaactcgtgaccttagcaggtcga
aaacttgcaactggtgcagattttgacgaatcaaccgggcaagttgccgcaggtcgaaac
gttgtgctgttaagtgaagaggaagcgagagcattacaagctcgcttagatgggaaaacc
tggactgtttcggatctcgaagaacgtccggtcactcgcaagccttccccaccttttacg
acctcaaccctgcaacaggaatcgaaccgtaaattagggctgtctgctcgcgacacgatg
cgaacggctcaaagtctgtatgagcaagggtatatcacctatatgcggacggactcggtg
cacttgtcccaacaagcgatcgcggctacccgcagttgtgttgaagaaatgtatggggca
gagtatctcagcccatctcctcgccaatacacgaccaagagcaaaggcgcacaggaagcg
cacgaagcgattcgtccggcaggcagcacgttccgcactccgaaacagaccggattaaaa
gatcgagagttaaaactctacgatttgatctggaaacgtaccgttgccactcaaatggca
gatgcgcggcaaactcaagttacagcgcaaattcaagtcgaagatgcgggtttccgagct
agcggcaaacgcattgattttccgggcttcttccgcgcctatgttgaaggatcagacgat
ccgaatgctgcgatcgagaaccaagaaatcatcttgccaccgatgcgagctggagatcat
ccgaactgccggaatctagaagcgatcggacatgaaacccaacctcctgcgagattcacc
gaagcatcgctggtgaaaactctagaaagtgagggaatcggtcgtccttcgacctatgcc
agcattattggcacgatcaccgatgagcgcaaagggtacgcgcatctggttggcaatacg
cttgttccgaccttcacggcttttgcggtggtcgatttattggaaaggcatttccccgat
attgtcgatttgcggttcacttccaaaatggagcaaaccttagacgatattgccgctggg
gaagtcgattggctgccgtatttgactcagttctactctggggatcaagggttagagact
caagtcaaagagcgcgatagcaatatcgatcccaaggaagcccgcacgattcatctagac
gatctcggaaccaaaattcggatcagccgaaccggagcctatatcgagtctgagaatggc
aatgtcaatttgcccagagatctgccgcctgctgatctccatcctgctcaggtcgagact
ctgctgaaaggaccgaacaagctgggatcgcatcctgaaacgggagaaccgatctacgtc
aaattgggaccttacgggcattacattcagcttggcgacaagactgaagagaatccgaaa
ccgaagaatgtttcggttcctccgaagatcaagcctgaagaagtgacgatggaaatggcg
ttgggcttgttaacgttgccccggactctgggagttcatcccgaaacgggtcgcaaaatt
caagcgtcactgggacggtttggaccgtatattgtgcatgacttgggcaaagacgaagac
ggtaagccgaagaaggattatcgatcgattaaagccccagatgatgtggtaacgattacg
ctggaacgggctttagagctatttgccgaacccaaagccgttcgcggcaagcgtgcagca
gccaaaccgcttcgggagttgggggcacatccgaatgatggagagccagtcaatatctat
gaaggcccctatggtccgtatctcaagcacggcaaggtgaatgcttctttaccggaaggt
cagacggtcgaagagatcacgatggatgttgcagtcgaggcattagcggcgaaagcagga
acgaaaaagacaacgcgatcgaagaagaaatcagaaacgacgaccgcgaagaaaacaacc
gcgaagcgcgcaaccaaaaccacgaccaagaaaaccacgacaaaagctgctgcagctaag
aaatcgactggcaccagcaagcgcgtcaagacaagcgaatag
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