Leptolyngbya boryana: LBWT_37510
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Entry
LBWT_37510 CDS
T04848
Name
(GenBank) ATP-dependent DNA helicase, Rep family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lbo
Leptolyngbya boryana
Pathway
lbo03420
Nucleotide excision repair
lbo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LBWT_37510
03430 Mismatch repair
LBWT_37510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbo03400
]
LBWT_37510
Enzymes [BR:
lbo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LBWT_37510
DNA repair and recombination proteins [BR:
lbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LBWT_37510
MMR (mismatch excision repair)
Other MMR factors
LBWT_37510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DEAD
Viral_helicase1
DUF1978
AAA_22
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
BAS57789
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All DBs
Position
3992858..3995200
Genome browser
AA seq
780 aa
AA seq
DB search
MAVDFLSHLNPSQKQAVQHFCGPLLVIAGAGSGKTRALTYRIANLVLTHRVDPENILAVT
FTNKAAREMKDRIERLFAEQQALTEYGQSLQSLPGHVQTKLRSQVYKSITKDLWIGTFHA
LCCRILRFDIEKFQDEKGRKWTKSFSIFDESDAQSLVKDIIINQLNIDDKKFDPRSVRYA
ISNAKNKGLTPRDYEREQSNFKGKVIANIYSVYQDKLAENNAVDFDDLIWIPVQLFRQNE
QIRAYWHKRFRHILVDEYQDTNRTQYELLQLLTTNGESARSFKEWDYRSIFVVGDADQSI
YSFRMADFTILMGFQQDFGDGLPDDDTRTMVKLEENYRSTENILQLANDLIENNTERIDK
VLKPTRGQGEPTFCYRAQDEIDEAEFVIQQMRRLEAVNSDLHWGKFAILYRTNAQSRAFE
EILVRWGVPYKIVGGLRFYDRKEIKDVLAYLRAIANPSDSLSLLRVINTPRRGVGKTTIE
ALQKAAIELGTPLWEILSDETSIKTLAGRSSKGVIQFVEIIQRWRAQIDTVSASELVQGV
LEDSGYVRDLKAQGTDEAEDRLQNVQELYNAVLQYEEENEDDKSLIGFLASASLASDLDD
TEEESTKVSLMTLHSSKGLEFPIVFLVGLEQGLFPSYRSLDDPAAIEEERRLCYVGITRA
QERLFISHARERRLYGNREPASPSLFLGELPRELMDSNTKAAIPKKFTEKKPQSKPAPVL
QSDVEWSVGDRVMHSQFGIGEVTNVFGSGSKATLAIRFDNLTGMKRKILPIGDRGLTAID
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcgattttttgagtcatctgaatccgtcccaaaaacaagccgttcagcatttt
tgtggtcctctgctcgtgattgcaggtgcaggctcaggaaagacgcgcgcattgacttat
cggattgccaacttggtgctgactcatcgagttgatcctgaaaatattctggctgtaacc
tttacgaacaaagcagcacgggagatgaaggatcgcatcgaacgactgtttgcagaacag
caggcattgactgagtatgggcaatcgctgcaatcgcttccgggacatgtgcagacgaaa
ttgcgatcgcaagtctacaaatccattacgaaagatctctggatcggaaccttccacgca
ctctgctgccggattctgcgcttcgatattgagaaattccaagatgagaaagggcggaaa
tggacaaagtctttctcgatttttgatgaatccgatgcccagagcttagtcaaagacatc
atcatcaatcaactgaatattgacgataagaaatttgatccacgcagcgttcggtatgca
atcagcaacgctaagaataaggggttaaccccgcgagattacgagcgagagcaatctaac
tttaaaggaaaagtgattgcaaatatctacagcgtttatcaagataaactcgctgaaaac
aatgcggttgactttgatgatctgatttggattccggtgcaactattccgtcagaatgaa
cagattcgcgcatactggcacaaacgctttcgtcacattctagtagatgagtatcaagat
acaaatcgcacacaatacgaattgctgcaacttctgaccacgaatggagaatctgcccgc
agctttaaagagtgggattatcgatcgatcttcgttgtcggcgacgcagatcaatcgatt
tactcgttccgcatggcagatttcacgattctgatgggcttccagcaagactttggcgat
ggactgcccgatgatgatacgcgaacgatggtgaaattagaagagaactatcgatcgaca
gagaacattctccaacttgcaaacgacctgatcgagaacaacacagaacggattgataaa
gttctcaaaccaactcgcggacaaggcgaaccgactttctgctatcgcgctcaagatgag
atcgatgaagccgaattcgtgattcaacaaatgcggagattagaagcggtaaattctgat
ctgcattggggtaagtttgctattctctatcgtaccaacgctcaatcccgagcctttgaa
gaaattttggtgcggtggggtgtcccttacaagattgtcggcgggctgcgattctacgat
cgtaaagaaattaaagacgttctagcttacttgagagcgatcgcaaatccatcggattca
ttaagtttgctgcgtgtgattaatactccgcgtcgtggcgtaggcaaaaccacgatcgaa
gccttacaaaaagcagcgatcgagcttggtactccactgtgggaaattctcagcgatgaa
acctcgatcaaaactctggcgggtcgatcctcgaaaggagtgattcaatttgtcgaaatt
attcagcgatggcgcgcacagattgacaccgtaagcgcttcagaactcgttcaaggggtt
ttagaagattcaggctatgtcagagatttgaaagctcaaggcaccgacgaagcagaagat
cgcttacagaacgtacaggagttatataacgcggttctgcaatacgaagaagaaaacgaa
gacgacaagagtttgatcggcttcttagcaagcgcctctttagcctccgatttggatgac
accgaggaagaatcgacgaaagtctcgctgatgaccttgcactcgtcgaaagggttggaa
tttccgatcgtatttctcgtcggtttagagcaagggttatttcccagttatcgatcgctt
gatgatccagccgcgatcgaagaagaacgtcgcctttgctatgtgggcattacccgtgct
caagagcggttatttatctctcatgctcgcgaacgtcgattgtatggaaaccgcgaacct
gcgagtccttcgcttttcctgggagaactcccgcgtgaattgatggatagcaatacaaaa
gctgcgattcctaagaaattcacagaaaagaaacctcaatctaagcctgcacccgtttta
cagagtgatgttgaatggagcgtgggagatcgcgtcatgcacagtcagtttggcatcggc
gaagtgacgaatgtgtttggtagtggaagcaaagcaacattagccattcgatttgacaat
ctaaccggaatgaaacggaagatcttgccgattggcgatcgcggcttaactgcgatcgat
taa
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