Leptolyngbya boryana: LBWT_380
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Entry
LBWT_380 CDS
T04848
Name
(GenBank) DNA-directed RNA polymerase gamma chain
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lbo
Leptolyngbya boryana
Pathway
lbo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lbo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LBWT_380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbo03021
]
LBWT_380
03400 DNA repair and recombination proteins [BR:
lbo03400
]
LBWT_380
Enzymes [BR:
lbo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LBWT_380
Transcription machinery [BR:
lbo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LBWT_380
DNA repair and recombination proteins [BR:
lbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LBWT_380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
BAS54155
LinkDB
All DBs
Position
45366..47231
Genome browser
AA seq
621 aa
AA seq
DB search
MPKIEQRFDYVKIGLASPERIRQWGERTLPNGQVVGEVTKPETINYRTLKPEMDGLFCER
IFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYIKLAAPVAHVWYLKGI
PSYMAILLDMPLRDVEQIVYFNAYVVLNPGNADNLTYKQLLTEDQWIEIEDELYSEDSQL
SGIEVGIGAEALKQLLQDINLDEEAERLREEIAVSKGQKRAKLIKRLRVLDNFIATGSLP
EWMVLDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVRN
EKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRSV
IVVEPKLKIHQCGLPREMAIELFQPFVIHRLIRQGLVNNIKAAKKLIQRNDPTVWDVLEE
VIEGHPVFLNRAPTLHRLGIQAFEPILVDGRAIQLHPLVCPAFNADFDGDQMAVHVPLSL
EAQAEARLLMLASNNILSPATGRPIITPSQDMVLGCYYLTAENPEATKGEGRYFANLDDA
ITAYEQNQIDLHSYVWVRFDGEVEGGNGDLIEQQEAEGIVTKIYESCRRREDADGNLISQ
YIKTTAGRIIYNKTVFDALVS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagatagaacagcggtttgactatgtgaaaatcggtctggcatctccggaacgc
attcgccaatggggagaacggactttaccgaatgggcaagtcgttggagaagtcacgaag
ccagaaaccatcaactaccgtacactcaagcctgaaatggacggcttgttttgtgagcgg
atttttgggcctgcaaaagattgggaatgccattgtggcaaatacaagcgggttcgccac
cggggaattgtctgtgagcgttgcggagtcgaagtaaccgagtcgcgcgttcgtcgtcac
cggatggggtatatcaaactggcggctcctgtcgctcacgtctggtacctcaaagggatt
ccaagctacatggcgatcttgctcgatatgccactgcgcgatgttgagcaaattgtttac
ttcaacgcttacgttgttctcaatcctggtaatgctgacaatctgacctacaagcaattg
ctgaccgaagatcagtggattgagatcgaagatgaactctacagcgaagattctcagctg
agcggaatcgaagttggcatcggggcggaagcactgaagcaactgctgcaagacatcaac
ttggacgaagaagctgaaagactgcgcgaagaaatcgcagtttccaaaggtcagaaacgc
gccaaattgatcaaacgtctgcgcgtcttagataacttcatcgcgacaggctcattgcct
gagtggatggtgttagatgtcattccggtgattccaccggacttgcgcccgatggtgcaa
ctcgatggtggacggtttgcgacttccgacttgaacgatttgtatcgtcgcgtgatcaac
cgcaacaatcgtctggctcgtctgcaagaaattctcgctcctgaaattatcgtgcggaat
gaaaagcggatgttgcaagaagcagtagacgcattgatcgataacggtcgtcggggtcga
acggtcgtcggggcaaacaaccgtccgttgaaatcgctctccgacattatcgaagggaaa
caaggtcgattccgtcagaacttgctcggtaaacgggttgactactccggtcgttctgta
atcgtagttgagccaaagctgaaaattcatcagtgtggactgccgcgagaaatggcgatc
gagcttttccaaccgtttgtgattcatcgcctaattcgtcaaggcttagtcaacaacatc
aaagccgcgaagaaactgattcagcgtaacgatccgaccgtttgggacgttctagaagag
gtgatcgaaggacaccctgtcttcctgaaccgcgccccgacgctgcaccgtctggggatt
caagcctttgaacccatcctcgtcgatggtcgtgccattcaactgcacccgcttgtctgt
ccagcctttaacgctgactttgacggtgaccaaatggcggttcacgtgccgctctcgctc
gaagctcaggcagaagcgcgcctcttaatgctggcatcgaataacattctttcgcctgca
accggtcgcccgatcattacgcctagccaagatatggtcttaggctgctactacttgacc
gcagaaaatccagaagcgacaaagggcgaaggacgctactttgcgaatctcgacgatgcg
atcacagcttacgaacagaaccaaattgatctgcactcctacgtttgggtgcgatttgat
ggcgaagtcgagggtggcaatggtgacttgatcgagcaacaagaagccgagggcattgtg
accaaaatctatgagtcttgccgtcgtcgtgaagatgcagacgggaatttgatttcgcag
tacatcaaaacaacagcagggcgaattatctacaacaagacagtgttcgacgcattggtt
agctag
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