Leptolyngbya boryana: LBWT_40170
Help
Entry
LBWT_40170 CDS
T04848
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
lbo
Leptolyngbya boryana
Brite
KEGG Orthology (KO) [BR:
lbo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lbo02000
]
LBWT_40170
Transporters [BR:
lbo02000
]
Other transporters
Pores ion channels [TC:
1
]
LBWT_40170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
BAS58053
LinkDB
All DBs
Position
complement(4240123..4241757)
Genome browser
AA seq
544 aa
AA seq
DB search
MLSPTTLAQTPILPTPKIALPQINSTDIVTTGIQLDGRELFTIALPATAQPNQPNQRSAI
AVRRQSIEATLQRFANQRNAPDLQVNSTLDANSNLPIISINQRYLMTVTTLDAQLQGQEP
TPYAEELTRIIRTALLEAERERQPEVITQQTGKAIATLGGMFALSWLVSRLQKYLRKRQR
LLEDETPSPADILPNTPETASPRTQLTVKQQMKSRRERTLQDMQRRSLQLMQIGIWMAGI
YFILGLFPDSRPLQPLVLSTPLKVLGIIVATYLVIRLSDLIVDRIFGALDISESTPDASQ
RVALRVSTFSGVAKGILSLMWISIGIVIILSIIGIQILPLLAGAGIIGIGISLASQNLIK
DMINGFLILFEDQYAVGDIIQVDDVSGLVEFISLRITQIRSADGRLITIPNSSIAIVENL
SKDWSRVDLSIVISYDADVDRAIQLIEKVGRDLSADPDWHTKILEAPQVLGVEDFSNAGI
TLRTWIKTQPLQPAVVGREFRRRVKQALDAAGISIGIPQQVFSVREAFQDDPFDSPNRSN
PEKQ
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
gtgcttagtccaacgactttggcacaaaccccaattctgccaactcctaaaattgccctt
ccccaaatcaatagcaccgatattgtcacgaccgggattcaacttgacggacgggaactc
ttcacgatcgcgctgcctgcgacggctcagccgaatcaaccgaaccaaagaagcgcgatc
gcagttcgtcgtcaaagtattgaagccaccttgcaacgattcgcaaatcaacggaacgcc
cctgaccttcaagttaattccacactagacgcaaatagcaacctgccgatcatttccatc
aatcaacggtatttgatgaccgtgacaacattggatgctcaacttcagggacaagaaccg
actccttatgcagaagaactcactcggatcattcgcaccgctttactcgaagcggaacgg
gaacgacagcctgaagtgatcacgcaacaaacgggaaaagcgatcgcgactctgggtggc
atgtttgcactcagttggctcgtttcccgcttgcaaaaatatttgcgcaagcgacaaagg
ctgcttgaagacgaaacgccgtcccctgctgacattttgccgaacacaccagaaacagcg
agtcctcgcactcaactcactgtcaaacaacagatgaaaagtaggcgggagcgaaccttg
caagatatgcaacggcgatcgctgcaactgatgcagatcggaatctggatggctggcatc
tatttcattttgggactctttccagattcgcgtcccctccaaccgctcgtcctttcaaca
ccattaaaggttcttggaattattgttgcgacttatctggtgattcgattgagtgatctg
atcgtcgatcgcatcttcggagcacttgatatttctgaatcaacgccagatgcctctcaa
cgggtggcactgagagtttcaacgttttcgggcgttgcaaaaggtatcctcagcttaatg
tggattagcattggcattgtgattattctatcgattatcggaattcaaatcctgccattg
ctcgcgggtgcaggaattattgggattggtatctctttagcgtctcagaatttgatcaaa
gatatgatcaatggatttctcattttatttgaagatcaatatgccgtaggcgatattatt
caagtcgatgatgtcagtggattagtcgaatttattagtctcagaattactcagattcgt
agtgcagatggacgattaatcacgattcccaatagttcgatcgcgatcgtcgaaaatctc
tcgaaagattggtcaagagtcgatttgtcgattgtcatttcatacgatgcagatgtcgat
cgcgcaattcagctgatcgaaaaagttggcagagatctcagcgcagatcccgactggcac
accaaaattctcgaagcccctcaagtattaggcgttgaggattttagcaatgcagggatt
accttacgaacttggattaaaacccaacctttacaaccagccgtggtcgggcgagaattc
cggcggcgagtcaaacaagccttggacgcagcggggatctcgatcggaattccccaacag
gtattctcggttcgagaagcattccaagatgatccatttgattccccgaatcgatccaac
ccagaaaagcaatag
DBGET
integrated database retrieval system
