Leptolyngbya boryana: LBWT_41870
Help
Entry
LBWT_41870 CDS
T04848
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
lbo
Leptolyngbya boryana
Pathway
lbo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LBWT_41870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbo03400
]
LBWT_41870
DNA repair and recombination proteins [BR:
lbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LBWT_41870
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LBWT_41870
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
RsgA_GTPase
AAA_29
AAA_16
AAA_23
nSTAND1
AAA_21
nSTAND3
DnaJ_CXXCXGXG
AAA_33
AAA_22
AAA_25
AAA_18
Viral_helicase1
NACHT
MeaB
cobW
GDH_HM1
Septin
Motif
Other DBs
NCBI-ProteinID:
BAS58224
LinkDB
All DBs
Position
4425547..4428546
Genome browser
AA seq
999 aa
AA seq
DB search
MKDYFFALRMPKRVSKPKSSDAPVLSPDLGAEIESNGSKKQPAQKAQKVVSLNSIRIRGA
RQHNLKNVDLDLPRDRLIVFTGVSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQVD
KPDVDAIEGLSPAISIDQKSTSHNPRSTVGTVTEIYDYMRLLYGRAGMPHCPICDRSITP
QTIDQMVDRVMELPDRTRFQILAPVVRGKKGTHRKLISGLAAEGFVRVRVDGEVRELSDS
IELDKNQLHTIEIVVDRLIKKDDMQERLSDSLTTCLKRSNGIAIIDLMREADSEDQPSEL
VFSENFACPEHGAVMEELSPRLFSFNSPYGACPNCHGIGSHRTFSPDLIIPNPNLPVYAS
IAPWSDKDNTYYLSLICSVAEAYGFDIQTPWNQLSAEQQHIMLYGSKDPIWIEVDSRYQE
NKGYHRRYEGAIPLLDRQYREASSDLYKQKLEQYLVDQPCDVCHGKRLKPEALAVRLGQY
HIQDFTGVSIRDCLDRVENLELSDRQAQIGDLVLREIRSRLQFLLDVGLDYLTLDRTAMT
LSGGEAQRIRLATQIGAGLTGVLYVLDEPSIGLHQRDNTRLLNTLTKLRDLGNTLIVVEH
DEETIRAADHLVDIGPGAGVHGGRVIAQGDLDTLLNAEESLTGAYLSRRRAIQTPAERRS
GNGRAITLGAAQRNNLKNIDVEIPLGKLVCVTGVSGSGKSTLINELLYPAIQHHFGHKVP
QPKEMKPVKGLDALDKAIVIDQSPIGRTPRSNPATYTGVFDCIREVFSETIEAKARGYKA
GQFSFNVKGGRCEACSGQGVNVIEMNFLPDVYVQCDVCKGARYNRETLQVKFKGKSIADV
LNMTVEEAADFFQNIPQAANRLQTLVDVGLGYMRLGQTAPTLSGGEAQRVKLATELSRRA
TGKTLYLIDEPTTGLSFYDVHKLLDVIQRLVDKGNSVLVIEHNLDVIRCSDWLIDLGPEG
GDRGGEIVAVGTPEDVVKHPKSYTGQYLKQVLEQYPAGS
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgaaggactatttcttcgccctccgaatgcctaagcgtgtcagcaaacccaaaagctcc
gatgctccggtcttaagtcctgatttaggagccgaaatcgaatcgaacggctcgaaaaaa
cagcctgctcagaaagctcaaaaagttgtttcactgaattccattcggattcgaggcgca
agacaacacaatttaaaaaatgtcgatctcgatctgccgcgcgatcgattaatcgtgttt
accggagtttcaggctcaggcaagtcttctctggcattcgacaccatcttcgcagaaggt
caacgccgctatgtcgaatcgctcagcgcttatgcacgacaatttctcggacaagtcgat
aagccagatgtcgatgcgatcgaaggattaagtccagcgatttcgattgatcaaaaatcg
acctctcataatcctcggtcaaccgtcggcacggtcacagaaatctacgactatatgcgg
cttctctatggtcgcgcggggatgccgcattgtccaatttgcgatcgctcgattactccc
cagacgatcgatcaaatggtcgatcgcgtcatggaattgcccgaccggactcggttccaa
attcttgcccctgtggtgcgtgggaagaaaggcactcaccgcaaattaatctcaggactt
gccgcagaaggatttgtgcgggtgcgcgtcgatggcgaagtgcgagagttgagtgattcc
atcgaattggataaaaatcaattgcacacgatcgaaattgtcgtcgatcgattaatcaaa
aaagacgacatgcaagaacggttgagcgattccttgaccacttgcttaaagcgatcgaac
ggaatcgccattattgatttgatgcgcgaagcagactcagaagatcagccttcagaactc
gtattctcagaaaatttcgcttgtccagaacatggtgcagtgatggaagagctttctccg
cgcctgttttcgttcaactcgccgtatggagcatgtccgaattgtcatggaattggcagc
catcgcaccttttcgcctgacttgatcattccaaatccaaatcttccggtttatgcctcg
atcgcgccttggtcagataaggacaacacttactatctttcgctgatttgcagtgttgcc
gaggcatacggattcgatattcaaaccccttggaatcaactgagcgccgagcagcaacac
atcatgctctacggttctaaagacccgatttggatcgaagtcgattcgcgataccaggag
aataaaggctatcaccgtcgatatgaaggagcgattcctctgctcgatcgacaatatcgc
gaagccagttctgatctgtacaagcagaaactcgagcagtatttagtcgatcaaccttgt
gatgtctgtcatggcaaacgattaaagccagaagcgctcgctgttcgcttagggcagtat
cacattcaagatttcacaggggtttcgattcgagattgtcttgatcgcgtcgagaattta
gaactgagcgatcgacaagctcagatcggggatctcgtgctgcgagaaattcgatcccgc
ttgcagtttctcctcgatgttggactcgattatttaacactcgatcgcaccgccatgacg
ctttcgggtggagaagctcaacggattcgactggcgactcaaatcggtgcaggattgacc
ggagtgctatatgtcctagacgagccaagtatcgggctgcatcaacgggataatactcgc
ttgctcaacaccctgacgaaacttcgcgatttgggcaataccttaatcgtggtcgaacac
gatgaagaaacgattcgggcagcagaccatttggtagacattggaccgggtgcaggcgtg
catggaggacgggtgattgctcaaggcgatctcgatacactgctgaatgccgaagaatcg
ctgactggagcctatctgtctcgacgacgggcgattcaaacgccagcagaacggcgatcg
ggaaatgggagagcgattacacttggcgctgcccaacgcaacaacctcaaaaatattgat
gtcgaaattccactaggtaaactagtttgcgtcacgggtgtatccgggtctggaaaatca
accttgattaatgaattgctctatcctgcaattcagcatcattttgggcataaggttccg
cagccgaaggaaatgaagcctgtcaaaggtttagatgcgcttgataaagcgatcgtcatt
gatcaatctccaatcggacgcacacctcgatccaatccagccacttatactggcgttttc
gactgcattcgcgaagtcttctctgaaacaatcgaagccaaagctagaggctacaaagcg
gggcaattttctttcaacgtcaaaggtggacgatgcgaggcttgtagcggtcagggtgta
aatgtcatcgagatgaacttcttacctgacgtgtatgtgcaatgcgatgtctgtaaaggc
gcacggtataaccgtgaaacgttgcaggtgaaatttaaaggcaagtcgatcgcagatgtc
ttaaacatgactgtcgaagaagccgccgacttctttcaaaatattccccaagcggcaaat
cgtctgcaaacgttagttgatgttggattaggatacatgcggttaggtcaaaccgctcca
actctctctggaggagaagcccagcgtgtgaaattagccactgagctatctcgacgtgca
accggaaagacgctgtatttaattgatgaaccgacaacaggcttgtccttctacgacgtt
cacaaactcttagatgtgattcaacgcttggtagataaaggcaattctgtgttagtcatc
gagcacaatttagatgtaattcgctgctcggattggttaattgacttaggccctgaaggc
ggcgatcgcggcggcgaaattgttgcagtcggtactccggaggatgtcgtcaagcatcct
aaatcctatacaggtcaatatcttaaacaagttctagaacaatatcctgctggatcatga
DBGET
integrated database retrieval system
