Leptolyngbya boryana: LBWT_45880
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Entry
LBWT_45880 CDS
T04848
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03090
RNA polymerase sigma-B factor
Organism
lbo
Leptolyngbya boryana
Brite
KEGG Orthology (KO) [BR:
lbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbo03021
]
LBWT_45880
Transcription machinery [BR:
lbo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LBWT_45880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_Crp_2
Sigma70_ECF
HTH_23
HTH_24
KORA
HTH_3
GerE
HTH_17
DUF134
SpoIIID
MarR_2
HTH_8
HTH_10
HTH_1
Motif
Other DBs
NCBI-ProteinID:
BAS58621
LinkDB
All DBs
Position
complement(4821663..4822436)
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AA seq
257 aa
AA seq
DB search
MPNLVSTDLKSETLELLHQYQTTATAAIRNQLVELNIGLVRKEAHHWMNQCTESYDDLLQ
VGCIGLIRAIERFDMSKGHAFSSFAIPYIRGEIQHYLRDKSPSVRIPRRWQALQRQATHV
IRDFQAKERRQPTDIEIAAILDISIEEWQEIRLSVQNRALLSLDAPVGDEEGTAFLGDLV
PDSRYRSFQLAQEDQIRLQQALVQLEQRTREVLEFVFLYDLTQKETAERLGISAVTVSRQ
VKKGLQKLQSIMVCSEA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcctaatcttgtgtctaccgacctcaaaagtgaaaccttagaactgcttcatcaatat
caaacgaccgcaactgctgctattcgtaatcaattggttgaattgaatattggactggtg
agaaaagaggctcaccactggatgaatcagtgtactgagagttacgacgatttgctccaa
gttgggtgtattgggctgattcgagcgatcgagcggtttgatatgtcgaaaggtcatgca
tttagctcatttgcaattccctacattcgaggagaaatccaacactacttacgggacaaa
agcccttcagtccgaattccgcgccgttggcaagcgctacaacgtcaagccactcacgtg
atccgtgactttcaagcaaaagagcggcggcaacccaccgatattgagatcgctgcgata
ttggatatctcgatcgaggaatggcaggaaattcggctctcggtgcaaaatcgcgcgctg
ctcagtttagatgctcctgtcggcgacgaagaaggcacagcatttttaggcgatctcgtt
cctgattcacggtatcggagttttcaactggctcaagaagatcaaattcggctgcagcag
gcactcgtccaattagaacagcgcactcgtgaagtgttggaatttgtttttctatatgac
ctgactcagaaagagacagctgagcgactaggaatcagcgctgtgacggtttcacgccaa
gtgaaaaaagggcttcagaaactgcaaagcatcatggtttgcagcgaagcttaa
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