Leptolyngbya boryana: LBWT_47220
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Entry
LBWT_47220 CDS
T04848
Name
(GenBank) exonuclease family
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lbo
Leptolyngbya boryana
Pathway
lbo03030
DNA replication
lbo03430
Mismatch repair
lbo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LBWT_47220
03430 Mismatch repair
LBWT_47220
03440 Homologous recombination
LBWT_47220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbo03032
]
LBWT_47220
03400 DNA repair and recombination proteins [BR:
lbo03400
]
LBWT_47220
Enzymes [BR:
lbo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LBWT_47220
DNA replication proteins [BR:
lbo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LBWT_47220
DNA repair and recombination proteins [BR:
lbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LBWT_47220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
HTH_17
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
BAS58755
LinkDB
All DBs
Position
complement(4964478..4965260)
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AA seq
260 aa
AA seq
DB search
MPVVLSTDLLAFYRDLSQRTLTVVDLETSGHKPPRSRAIEVSVLNANLKDGILNQETYLI
NPGVLIPPIITNITGITQDMVDGAPPPDEVWLKCLPLFEQGTLTAHNIGFDYPFIRAEYA
RLGIPFYRSQSEQFCTVQFARLMLSELPSRSLPNLVKHFQFPVGASHRAEADTMACWLLA
EMLLKEIANEDDEAVLAKIGQQLLSTSEAAKLIGGSQKSVRSRLEQAGAEPYISRTGTPL
YRRADVERLYWQKHQLSLSS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgccagttgttctttctacagatttgcttgccttctatcgtgacctgagccagcggact
ctcaccgtcgttgatctggaaacctctgggcataaaccgcctcgcagtcgagcgatcgag
gtgtcggttctgaatgcaaatttgaaagacggcattctgaatcaagaaacgtatttgatc
aatcctggcgtgttgattccgccgatcattacgaatattacgggcatcacgcaagacatg
gtggatggtgcaccgccgccggatgaggtgtggctcaagtgtttgcccttgttcgagcag
ggaactttaacggctcacaatattggatttgactatccgtttattcgagcagaatatgcg
cggttggggattccattttatcgatcgcaatccgagcagttttgcactgttcaatttgca
cgcttgatgctctcagagttgccttctcggagtttgccgaacttggttaaacattttcag
tttccagttggcgcatcgcatcgcgcggaagcagacacgatggcatgttggctacttgca
gaaatgctcttgaaagagattgcaaatgaagatgatgaagcggttttagcaaaaattgga
cagcagcttctttcgacgagtgaggctgccaaactgattggcggctcgcaaaaatcagtg
cgatcgcggcttgagcaagcgggtgctgaaccctatatttctcgaaccggaacaccgttg
tatcgccgtgcagatgttgagcgtctttattggcaaaagcaccaactttctttgtcgtct
tga
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