Leptolyngbya boryana: LBWT_50800
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Entry
LBWT_50800 CDS
T04848
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
lbo
Leptolyngbya boryana
Brite
KEGG Orthology (KO) [BR:
lbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbo03016
]
LBWT_50800
Enzymes [BR:
lbo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LBWT_50800
Transfer RNA biogenesis [BR:
lbo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LBWT_50800
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
BE_C
DUF6447
Motif
Other DBs
NCBI-ProteinID:
BAS59111
LinkDB
All DBs
Position
complement(5380636..5381265)
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AA seq
209 aa
AA seq
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MQPREFQICDRDLSSELLQRYRSASAIAVDTETMGLLPHRDRLCLVQICDENDQVAVVRI
ERGQKEAPNLKQLFEAAEITKIFHFARFDITALRYHLGIDVNPIFCTKLASKLIRTYSPR
HGLKDLVQELTGVELDKSAQSSDWGNAMNLSEAQLRYAANDVRYLIEARQKLIAMLEREE
RLELAEACFRCLPTFAQLDILQYQSVFDH
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgcgtgaatttcagatctgcgatcgtgatctttcttcggaacttttacagcgt
tatcggtctgcgagtgcgatcgcagtggataccgaaacgatggggcttctaccgcaccgc
gatcgtctgtgcttagtgcagatctgtgatgaaaacgatcaggttgcagtggtgagaatt
gagcggggacaaaaagaggctccgaatctcaaacaactgtttgaagcggcagaaattacg
aagattttccattttgctcggtttgatatcacagcattgcgatatcacttaggaattgat
gtcaatccgattttttgtactaagcttgccagtaagctgattcgcacttattcgcctcgt
catgggctgaaagacttagttcaggaattgacaggagtagaactcgacaaaagcgctcag
agttcggattggggcaatgcaatgaacttatcagaagctcagttgcgatacgctgccaat
gatgttcgatatttgatcgaagcgcggcagaaattgattgccatgttggagcgtgaagaa
cggctggagctggcagaagcttgttttcgatgtttgccgacatttgctcagctcgatatt
ttgcagtatcagagtgtattcgaccattga
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