Leptolyngbya boryana: LBWT_51390
Help
Entry
LBWT_51390 CDS
T04848
Name
(GenBank) RecQ familyATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lbo
Leptolyngbya boryana
Pathway
lbo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LBWT_51390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbo03019
]
LBWT_51390
03400 DNA repair and recombination proteins [BR:
lbo03400
]
LBWT_51390
Enzymes [BR:
lbo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LBWT_51390
Messenger RNA biogenesis [BR:
lbo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LBWT_51390
DNA repair and recombination proteins [BR:
lbo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LBWT_51390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF7102
Motif
Other DBs
NCBI-ProteinID:
BAS59170
LinkDB
All DBs
Position
complement(5446153..5447541)
Genome browser
AA seq
462 aa
AA seq
DB search
MLLHDRLKQFWGYSEFRPPQGEIVQTILNNQDAMIVLPTGGGKSLCFQLPAVMRSGLTIV
VSPLVALMENQVQDLQQRRIPAALIHSELPAAERKRILSTIARYRLLYLSPETLLSASVW
QRLLEVKINTLIVDEAHCLTQWGETFRPVYYRLGAVRAALSHNRDRIAIAAFTATANSLA
QATIERILQLEKPQIFRLSPYRANLNLQIQSVSTPRQRRQKLLAVINSQMGSGLVYVRSR
SESEELAEWLTQQGHRTGAYHAGLKSIDRRCIEQDWISDRLRFVICTCAFGMGIDKAETR
WVVHYHAPFLMSEYVQEIGRAGRDGKKATAVLLKSSWLDSEDRQRWQFFATQEQNQIQKA
QTLIQKLPQQGNVDQVSREFKGAAIALSLLYSAQQLVWTDPFHYQIQSRRRLAQASSLNS
TQSMQNYLKTKDCRWQFILRSFGFEQDALNFTCGHCDRCQQN
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgcttttacacgatcgcttaaaacagttctggggctattctgaatttcgtccgcctcaa
ggtgagattgttcaaacaatcttgaataatcaagatgcgatgattgttctcccgacaggc
gggggtaaatctctatgttttcaactgccagcagtgatgcgatctggattaacgatcgtg
gtatctcctctcgtcgctttaatggagaatcaagttcaagatttgcaacagcgccgaatt
ccagccgcattgatacatagtgaacttccagccgcagagcgtaagcggattttgagcacg
atcgcacgttaccgtttgctttatctttctcctgaaacgttactcagcgcatctgtttgg
caacgattgctcgaagttaaaattaacacgctaattgttgatgaagcgcattgtttaacc
cagtggggtgagacatttcgacccgtttactatcggcttggggcggttcgagcagcctta
tcacacaatcgcgatcgtattgcgatcgcagctttcactgccactgcgaattccttagct
caagcaacgattgaacgaattttacaacttgaaaagccgcaaatcttccggctcagtccg
tatcgagcaaatttgaatctgcaaattcaatcggtttcgactccgcgacagcgcagacag
aaattactagccgtgatcaattcgcagatgggatcgggtttagtttatgtgcgatcgcga
agcgaaagtgaggagcttgcagaatggctcacacaacaagggcatcgaaccggggcatat
catgctggattgaaatccatcgatcgccgatgcattgaacaggattggatcagcgatcgc
ttaaggttcgtcatttgtacctgtgcatttggcatgggcattgacaaagctgaaactcgt
tgggtggtgcattatcatgcgccgtttctgatgagtgagtatgtgcaagaaattgggcgg
gcagggagagatggaaaaaaagcgacagcagttctcctcaaaagcagctggcttgattca
gaggatcgccaacgttggcaattctttgcaactcaagagcaaaatcaaattcagaaggct
caaacgttaattcaaaagcttccgcagcagggcaatgtcgatcaggtgtcgagagagttc
aaaggagccgcgatcgcactttctctgctttacagtgctcagcagttagtttggactgat
ccatttcactatcaaattcaatcgaggcgaaggctagcacaggcttcaagcctcaattct
actcagtcgatgcagaactatctgaagacaaaggactgtcgatggcagtttattttaagg
tcatttggcttcgagcaagatgctttgaattttacttgtggtcactgcgatcgctgtcaa
caaaattaa
DBGET
integrated database retrieval system
