Leptolyngbya boryana: LBWT_52630
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Entry
LBWT_52630 CDS
T04848
Name
(GenBank) RNA polymerase, sigma subunit, RpsC/SigC
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
lbo
Leptolyngbya boryana
Brite
KEGG Orthology (KO) [BR:
lbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbo03021
]
LBWT_52630
Transcription machinery [BR:
lbo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LBWT_52630
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
LexA_DNA_bind
Arm-DNA-bind_1
FlgK_D1
HEAT_2
Motif
Other DBs
NCBI-ProteinID:
BAS59294
LinkDB
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Position
complement(5568107..5569351)
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AA seq
414 aa
AA seq
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MMPATSFYADAEFDPSTLEQPSTLSETEFDPNADLAELEAELAGQMEMRAAGRKTTDLVR
LYLQEIGRYHLLGRDEEVAEAQKVQRYMKLLEQRNDAANKGNDSIRQFVDLMDARDRLVS
TLTHRPSLERWAAEANIEVANLKPLLAEGKQHWAQVVKLSVAELEQIQSQGLTAKTRMIN
ANLRLVVSVAKKYQNRGLELLDLIQEGTLGLERAVEKFDPTKGYRFSTYAYWWIRQGITR
AIATQSRTIRLPVHITEKLNKIKKAQRKISQEKGRTATIEDIATELEMTPPQVREVLLRV
PRSVSLETKVGKERDTELGDLLETEEVTPEETLMRESLRRDLLQLLADLTTRERDVIQMR
FGLGSDGHPYSLAEIGRALELSRERVRQIEAKALQKLRQPKRRNRVRDYLESLS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgatgccagcaacttctttctacgctgatgcagagtttgatccctctacactagagcaa
ccctcaaccctatcagaaaccgaatttgatcccaatgcggatctcgctgaacttgaagcg
gaactggcagggcaaatggaaatgcgcgccgctggacggaaaaccactgacttagtgagg
ctctacctgcaagagatcggccgctaccacttacttggacgcgacgaggaagtggctgag
gcgcaaaaagttcaacgctacatgaagctattagaacagcgcaatgatgccgctaacaaa
ggcaatgattctatccgtcaatttgtagacctaatggatgcccgcgatcgcttggtgtcc
acactgacccaccgcccgtctctcgaacgctgggctgccgaagcaaatatcgaggtcgct
aacctcaaacctctcttggcagaaggcaaacaacattgggcacaagttgtgaaactcagc
gttgccgaactcgagcaaattcaaagtcaaggactcactgcgaagactcgcatgatcaat
gcgaacctgcggttagtcgtctccgttgccaagaaatatcaaaatcgcggtttagaactc
ctagatttgatccaagagggcacactcggcttagagcgagccgttgagaagtttgatcca
accaaaggctaccgattcagcacctatgcgtattggtggattcggcaaggcatcacgcgc
gcgatcgccactcaaagccggacaatccgcctgcccgtccacattacggaaaagctgaat
aagatcaaaaaagctcagcgcaagatttctcaagaaaaggggcgaactgccacgatcgaa
gatattgcaacagagctagaaatgacaccgcctcaagttcgggaagtgttgttgcgagtt
ccgcggtctgtatcgctagaaactaaagtgggcaaagagcgagacaccgaactcggcgac
ttgctggaaacagaagaagtcacgcctgaagagacgttgatgcgggaatcactgcgccga
gatttgctgcaattgcttgccgatttaaccactcgtgaaagagatgtgattcaaatgcgc
tttggtctaggaagcgatggacatccttattctttagcagagattggacgcgcgctcgaa
ttgtctagagagcgagtgagacaaatcgaagcgaaggcgctgcaaaaacttcgtcaaccg
aaacggcgcaatcgcgttcgggactatctcgaatcgctgagctga
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