Leptolyngbya boryana: LBWT_57400
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Entry
LBWT_57400 CDS
T04848
Name
(GenBank) WD-40 repeat-containing protein
Organism
lbo
Leptolyngbya boryana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Beta-prop_DCAF4
RMC1_N
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_Vps41
Ge1_WD40
PROPPIN
WD40_like
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
NB-ARC
Beta-prop_NWD2_C
Beta-prop_WDR35_TULP_N
nSTAND1
Beta-prop_RIG_1st
AAA_22
Nbas_N
AAA_16
Nucleoporin_N
NACHT
Beta-prop_IFT122_2nd
Beta-prop_IFT80_2nd
ATPase_2
Pentapeptide
NPHP3_N
AAA
Xpo1
TniB
SRP54
Motif
Other DBs
NCBI-ProteinID:
BAS59765
LinkDB
All DBs
Position
6095027..6098548
Genome browser
AA seq
1173 aa
AA seq
DB search
MDIDATLAFTDRLVFEKIGIHLNDLQLAMLRSSWSWERQSYDQIADTYGYSGTYLKHDVG
PKLWKLLSEVLGEKVNKTSFRAAIERRFQAQEQKQPVISKQIIQAQDWGDAVDVSFFCGR
EHELSQLQQWICEDQCRLISIVGIGGMGKTSLSVKLAKQLQNQFDWIIWRSLRNAPSVQE
LLLDVIQVLSSEAISNQRDVTISRLLQEMRSRRCLLVLDNVETVLQGNQYRSGYEQYGEL
FRQLGETIHQSCSVLTSREKPYEIGMLEGNVLPVRSLMLRGLTLAAGQQLLQIKGTFRGT
ETDWSRLIAGYSGNPLALKMISTTIQNLFDGQLADFLSQDAWALGNIRSLIEQQFQRLSE
SEKTVMDWLAVYREPVSFSELKADIFPPLSVQRLIEILELLEQRSLIEKVNAKFSLQPVI
MEYVTDCLVEKVCQEIQTGELLRLKTHALLKPQASDDVREAQIRLSLQPVISTLQANSPG
NIEHLLVDRIHQLQDNPVSDIGYAGGNLLNLLCQIQPRLKHHDLSDLAIWQADFRQVNLD
RVNLANSDLSRSAFADTLGVVFTVAFSPDGTQLATGDAEGGLRLWQVSSGEPLLNLSGHR
GWVWAVAFSPDGSLLASCSSDKTIRVWQVETGECLQVLRGHTSAIWAVAFSADGTTIVSG
GDEPTVQLRNVKTGECYQVLTGHTGRILSVAFSADGQYLASGSDDRTVRIWAMQSGECQA
IYQQHRDRIWSVAFSPDGQLLASGSADHTIRLWALETGECLNVLSEHRDRVRSITFSSDS
QRLVSSSDDQTIKVWDIHTGQCVQTLKGHTNSVFSVAFNQLIASGSTDHTVKLWDTTTGR
CLKTLTGYTNSIFSVAFHPDGQLLASGSTDRTLRLWSIQSGTCLKTLRGHQDWVTSVTFH
PNGEWAASSSLDRTVRIWSVATGECLKQLQGHSNWVQSVAFSPNGQILASGSDDQTIRLW
SVETGQCLEVLTGHSSWIWAVTFSSDGSVIASSSDDQTIRIWSVEAAECLHVLQGHTGQI
QAIAFSPDGTLLASGSGDETVRVWNVQTGECVQILQGHENNVWTVAFSLDGRFLASGSLD
QTVKLWETEHFACAKTLPILMHSVRSSIAFRPGETMTIATGSHDGTVRMWDLQDAQCLQT
FIPDRPYEGTNIRGVTGITSAQRLALKALGVTD
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggatattgacgcaacactagcctttactgatcgacttgtgtttgaaaaaattggcata
catctgaacgatctgcaattggcaatgctgcgatcgtcttggtcgtgggagcgtcaaagt
tatgaccaaattgctgatacttatggctattcaggaacttatctaaaacacgatgttggt
ccaaaactttggaaattgttgtcagaagttctgggtgaaaaagtcaataaaaccagtttt
cgagccgcgatcgagcgacgctttcaagctcaagaacagaaacaaccagtcattagcaaa
caaatcattcaagctcaagattggggcgatgctgtcgatgtgagttttttttgtgggcga
gagcatgagctatctcagttacagcagtggatttgtgaggatcaatgccgcttgatctca
attgttgggatcggcgggatgggtaaaacttcgctctcggtgaagcttgccaaacagctc
caaaaccagttcgactggattatttggcgatcgctcagaaatgctccatctgttcaggaa
ttgctgctagacgtgattcaggtgttatcgagtgaagcaatttctaatcagcgagatgtg
acgatttctcgattattgcaagaaatgcgatcgcgacgctgtttactcgtactggacaat
gttgaaaccgttctgcaagggaatcagtatcgcagtggctatgagcaatatggagaattg
tttcggcagcttggagaaaccattcatcaaagttgtagtgtgctgacgagccgcgagaaa
ccttatgaaattggtatgctagaaggcaatgtgctacctgtgcgatcgctgatgttgcgc
ggcttaacgcttgcagcgggacagcagcttttgcaaattaagggaacctttcgcggcaca
gagacggactggagccgattgatcgccggatattcaggcaatcccttagccttgaaaatg
atttccacgacgattcagaatttatttgatggacaattagcggattttctcagccaagat
gcttgggcattaggcaatattcgatcgctgatcgagcaacaatttcagcggctctcagag
tccgaaaaaacggtgatggattggctagcagtgtaccgtgagccagtttcattttcagaa
ctcaaagctgacatatttccgccgctttcagtgcagcgattgatcgagattttagaactc
ctagagcaacgctctttaatcgaaaaggtgaatgcgaaattttcgctccagcctgtgatc
atggaatacgtgactgattgcttggtggaaaaagtttgccaggaaattcaaaccggagag
ctgctccgcttaaaaactcacgcattgctcaaaccccaagctagtgatgatgttcgagag
gctcaaattcgattgagtttgcagcctgtaatctcgactttacaagcaaattctccaggg
aacatcgagcatcttttggtcgatagaattcaccaacttcaagataatcccgtatcagat
atcggctatgcaggtggaaatctcttaaatttactttgtcagatccaacctcggctgaag
catcatgacttatctgatttagcaatttggcaagcagatttccgccaggtgaatctcgat
cgagtaaacttagcaaattctgatctcagtcgttctgcatttgcagacacattgggcgtg
gtctttacggttgcttttagtcccgatggtactcagttagctacaggcgatgctgaagga
ggattgcggctttggcaagtttcttctggagaaccgttattgaatctttcaggacatcgg
ggctgggtttgggcagttgcttttagtcctgatggaagcttgctagcaagttgtagcagc
gataaaacaattcgagtctggcaagtcgagactggtgaatgtttgcaagttcttcgaggt
catactagcgcgatttgggctgttgcgtttagcgcagatggaactacgatcgtaagtggt
ggcgatgagccaactgttcaactgcgaaacgttaaaacaggagaatgctaccaagtttta
acgggtcatacgggtcgaattctttcggttgcatttagcgccgatggtcagtatttagca
agtggcagcgatgaccgaactgtgcgaatttgggctatgcagagtggcgaatgtcaggca
atttatcagcaacatcgcgatcgcatttggtcagttgcatttagtcctgatggtcaactg
cttgccagcggaagcgcggatcatacaattcgattatgggcattagaaacgggtgaatgt
ttaaatgtcttgagcgaacatcgcgatcgagtgcgatcgattacttttagctcagattct
caacggttagtcagtagtagcgatgatcaaaccattaaagtttgggacatccacactggg
caatgtgtgcaaacactcaaggggcacacgaattctgtcttctcagtggcgttcaatcag
ttgattgccagcggtagtactgaccatactgttaagctttgggatactactacaggtcgc
tgtttaaagaccctcacaggctatacaaactctatcttttcagtcgcatttcacccagat
gggcaattgctcgcgagcggaagtacagatcgcacccttcggctctggtcaatccagtca
ggaacttgcttgaaaacgctacgaggacatcaagattgggtcacttcagtcacctttcat
ccgaacggagaatgggctgcgagtagtagtctcgatcgaactgttcggatttggtcagtt
gcaaccggggaatgcctcaaacaattacaaggacactcaaattgggtacagtctgtagca
tttagtccgaatggtcagatcttagcgagcggcagcgatgatcaaacgattcggctctgg
tcggtcgaaactggacaatgcttggaggttttaaccggacattcgagttggatttgggca
gtgacttttagttcagatggctcagtgattgcgagtagtagtgatgatcaaacgattcgg
atttggtcagtggaagcagcggagtgcttgcacgtactacagggacatacagggcaaatt
caagcgatcgcttttagtccagacggaacgttacttgccagcggcagcggagatgaaacc
gtcagagtttggaatgttcaaaccggggaatgtgtgcagatcttacagggacacgaaaac
aatgtctggacagttgctttcagtttggatggtcgttttttagcaagtggaagcttagat
caaaccgtgaaactctgggaaactgagcattttgcttgtgcgaaaacactgccgattttg
atgcattcggtcagatcctcgatcgcgtttcgtccaggcgaaacaatgacgatcgcaacc
gggagccatgatggaacagttcggatgtgggatttgcaagatgcacagtgtttgcagacc
ttcattcctgatagaccctatgaagggacaaatattcggggagtaaccggaattacttct
gcgcagagattagcgctgaaagcattaggcgtaacagattaa
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integrated database retrieval system