Leptolyngbya boryana: LBWT_Y0520
Help
Entry
LBWT_Y0520 CDS
T04848
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
lbo
Leptolyngbya boryana
Pathway
lbo02010
ABC transporters
lbo03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lbo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LBWT_Y0520
03070 Bacterial secretion system
LBWT_Y0520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lbo02000
]
LBWT_Y0520
02044 Secretion system [BR:
lbo02044
]
LBWT_Y0520
Transporters [BR:
lbo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LBWT_Y0520
Secretion system [BR:
lbo02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LBWT_Y0520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Peptidase_C39
ABC_membrane
SMC_N
AAA_22
ABC_ATPase
AAA_29
AAA_21
RsgA_GTPase
MMR_HSR1
SbcC_Walker_B
AAA_16
Guanylate_cyc_2
Peptidase_C39_2
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
BAS60464
LinkDB
All DBs
Position
pLBY:39499..41676
Genome browser
AA seq
725 aa
AA seq
DB search
MQVSFKNRFGCFPLIYQQSTMDCGAACLATICRYYGKHVSLNRIRELAHVGQSGSSMLHL
LKAANTLGYETEAILETYDNLVQKPLPAIVNWRGYHWVVVYKANDRTVKVADPGEGLLNL
SKADFLKGWTRYTLYLKPTEVIKQIEESKPTLQQFVPYVNSYKYLVLEIALASLVIQLLG
LCLPILTKFILDKVVINQTSYWLLYSLIVLCTVVLLNAYISSCRQQLLLFVSMRTNLLML
TDFYKHLLSLPLCFFEARKVGDVTSRFEETQKITNFFTHIGLQSFLNVFSAILYLGLMFY
LNSALTLVACFFLALHLVNLYWVTPQMQYSYRNVFEKGADAQSFLIESLSGLGTIKTLGI
EYPTRWQAENLYLRSTNAYLRTIQLGIVSNLASGVVSHLSDSAVLFYGAIMVLQSQMTVG
ELVAFTLLAKSFSAPVTQLVGIWNVFQETLNAIERVNDVLESKPELNVKAAKENIRLPNL
QGHVQFERLTFRYESDGQRNVLQNISLEVQPGERIAFVGRSGSGKSTLIKLLLGFYPPSL
GKIYLDGFDVAKAWLPSLRSQIGVVTQHSDLFEGTIRENIAYGNSGSSLDEIIEAAKCAA
AHEFISQLPQQYDTMLAEKAENLSGGQRQRIALARALVRKPRLLILDEATSALDHETEAL
VLKNLDNFFHNLTILFISHRLSTVATADRIVVIEGGNILEQGTHEQLITKRGLYYYLSSQ
QLREA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcagctttaagaatcgcttcggctgttttccattgatctatcagcaaagcaca
atggactgtggtgctgcctgtttagcaacaatttgtcgttactacggaaagcacgtcagc
ctcaaccgaataagagagttggctcatgttggacagtcagggtcttccatgctccatctg
ctaaaagcagccaataccttgggatatgaaacagaagcaatattggaaacctacgacaat
ttggttcaaaagccattgcctgcgatcgtgaactggcgagggtatcactgggttgtcgtt
tacaaagcgaacgatagaactgtgaaagttgccgatccaggggaggggcttctgaacttg
tccaaagcggattttctgaaaggctggactcgttacacgctttacttgaaaccaacggaa
gtcattaagcagatcgaagagtcaaaacctaccttgcaacagtttgttccctatgtaaat
tcatacaaatacttagtgctggaaattgctttagcatcattggtgattcaattgcttgga
ctgtgtttgccaatcttgactaagtttattttagataaagttgttatcaatcaaacctcg
tactggcttttgtatagcctaattgttctttgtacagttgttctattaaatgcctatatc
agttcttgccgtcagcaacttctcttgttcgtttccatgcgaacaaatctgctgatgttg
actgatttttataagcatttgctctccctgcccttatgtttttttgaagctcgtaaggtt
ggagatgttacgagtcggttcgaggaaacccaaaaaatcaccaatttttttacacacatt
ggtttgcaatctttcttgaacgtgttctctgccattctgtatctgggactcatgttctat
ttaaatagtgcactcacactcgttgcctgtttctttttggctttacacctcgttaaccta
tactgggttactcctcagatgcagtattcctaccggaatgtgtttgagaagggagcagat
gcccaaagctttctgatcgaatccttgagtggattgggcactatcaaaactttggggatt
gagtacccaacccgttggcaggcagaaaatctatatcttcgttctaccaacgcctatcta
cgaactattcaactgggcatcgtttctaacttggcaagcggagtcgtcagtcatttgagt
gactctgctgtgctgttctatggagcgatcatggtgcttcagagccagatgaccgtggga
gaacttgttgcatttaccctattggcaaaaagcttttctgctccggttactcaactcgtt
ggaatttggaacgtttttcaagaaaccttaaatgctattgagcgggtgaacgatgtgtta
gagagtaaacccgaattaaatgtcaaagccgcaaaagaaaacattagattgccgaatcta
caaggtcatgtccaatttgagcgtctgacatttcgttatgaatctgatggtcagagaaat
gtcttgcaaaatattagcttagaggtgcagccgggagagcgaatcgcgttcgtcggtcgc
agcggctcaggtaaatcgaccctaatcaagctactgcttggtttctatcccccttcctta
ggcaaaatttatctagacggctttgatgttgctaaggcttggctaccttctcttcgctcc
cagattggtgtggtcacccagcacagtgatctgtttgagggcaccattcgcgaaaacatt
gcttatggaaattcaggatcctctttggacgagattattgaggcagcaaaatgtgcggct
gctcacgaatttattagtcagttacctcaacagtacgatactatgctcgcggagaaggca
gaaaatctcagcggggggcaacgtcagcggattgcgcttgctcgtgctctggtgagaaag
ccacgccttctcattttggatgaggcaacttcagctctagatcacgaaacagaagctcta
gttcttaagaatttagataacttttttcacaatctcactatactttttatttctcatcga
ctctcgactgtcgcgacggcagatcgaattgtagtaattgaaggaggcaatattttagaa
caaggaactcacgaacaactgatcacaaagcggggtctctattattacttgagttcccag
caattgcgagaggcataa
DBGET
integrated database retrieval system
