Lachnospiraceae bacterium JLR.KK008: V1224_03115
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Entry
V1224_03115 CDS
T10585
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
lbp Lachnospiraceae bacterium JLR.KK008
Pathway
lbp00300
Lysine biosynthesis
lbp00470
D-Amino acid metabolism
lbp01100
Metabolic pathways
lbp01110
Biosynthesis of secondary metabolites
lbp01120
Microbial metabolism in diverse environments
lbp01230
Biosynthesis of amino acids
Module
lbp_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lbp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
V1224_03115 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
V1224_03115 (dapF)
Enzymes [BR:
lbp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
V1224_03115 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WWR16465
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Position
626209..627063
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AA seq
284 aa
AA seq
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MKFTKMHGCGNDYIYIDGNRERIPEDKRPAAVRFLSDRHFGAGGDGVIFINPSSEADFEM
EMYNADGSRAEMCGNGIRCVAKYVYDKGLTDNKEFTIVSAGMCKKISLTTREGKAVTARV
DMGRPELKAEKIPVIASGGQVIDEEITVQGETYRMTCVSMGNPHAVVFMEDIKQMQIETI
GPQFENHPRFPKRINTEFVHVIDRQNVEMRVWERGTGETLACGTGCCAVAAACVLNGFTD
RNVTVHVLGGSLSIEWDEREDTIYMTGPAETVYEGEIDMALLTD
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacaaaaatgcacggctgtgggaatgattatatttatattgatggaaacagg
gagcggatacccgaggataaaaggccggcagccgtccgctttctgagtgaccggcatttt
ggcgctggcggggacggcgtgatctttatcaatccgtcttccgaagcagattttgagatg
gagatgtacaatgcggatggcagcagggcagagatgtgcggcaacggcattcgctgtgtg
gccaagtatgtatatgataaaggactgacagacaacaaagaatttactatcgtcagcgcc
ggcatgtgcaagaagatcagcctgacgacaagagagggaaaggctgtgacagccagagtt
gatatgggacggccggagctgaaagcggagaagattcctgtcattgcttccggcgggcag
gtgatcgatgaggagatcaccgtacagggggagacataccggatgacctgcgtatctatg
gggaatccccatgcagtcgtgtttatggaagacatcaaacagatgcagatcgaaacgatt
gggccgcaatttgaaaatcatccacgctttccgaagcggatcaatacggaatttgtgcat
gttatcgacaggcaaaatgtggagatgcgtgtgtgggagagaggcacgggggaaacgctg
gcctgtgggacgggctgctgtgccgtggcggctgcctgtgtgttgaatggttttacggac
cggaatgtgaccgtacatgtactcggcggcagcctgtcgatcgaatgggacgagagagag
gacacgatctatatgacagggccggcggagacggtatatgaaggcgagattgacatggct
ctgctgaccgattga
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