Lachnospiraceae bacterium JLR.KK008: V1224_04560
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Entry
V1224_04560 CDS
T10585
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lbp Lachnospiraceae bacterium JLR.KK008
Pathway
lbp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V1224_04560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbp03400
]
V1224_04560
Enzymes [BR:
lbp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
V1224_04560
DNA repair and recombination proteins [BR:
lbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V1224_04560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Zn_ribbon_SprT
Motif
Other DBs
NCBI-ProteinID:
WWR16710
LinkDB
All DBs
Position
900089..900646
Genome browser
AA seq
185 aa
AA seq
DB search
MQCTWNDIEQYVAVCTLCPLSRTRQRPVMGRGNFQADIMLIAEAPGGQEDRQGIPFVGRS
GEILDDLLRDCGLDRTEIYITNIVKCHPPGNRDPEEEEKAACFPFLKYETFLLKPRIIVC
LGRVAAQRIISPDFKITRQHGTWICRKGCALTATYHPSAILRDPSKYETAKEDFYQIVKK
RDELR
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgtacctggaacgatattgaacaatatgtcgctgtctgtaccctctgtccgctg
agccggaccaggcagcggccggttatgggccgtggaaattttcaggcggatataatgttg
atcgcggaggcgccgggaggacaggaagaccggcagggaattccgtttgtcgggcgttcc
ggggagatattggatgatcttttgagggactgcggactggacagaacggaaatttacata
accaacattgtgaaatgtcatccgcccgggaatcgtgatccggaggaagaggaaaaggcg
gcatgttttccttttctgaagtatgagacatttcttttaaaaccgagaatcattgtctgt
cttggccgtgtcgctgcacagcgtattatttcgccggattttaagattaccagacaacat
ggtacatggatatgccgtaaaggctgtgcgctgactgcgacataccatccctcggctatt
ttgcgggatccttccaaatatgaaactgcgaaggaagatttttaccagatcgttaagaaa
agggatgagttacgttga
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