Lachnospiraceae bacterium JLR.KK008: V1224_06465
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Entry
V1224_06465 CDS
T10585
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lbp Lachnospiraceae bacterium JLR.KK008
Brite
KEGG Orthology (KO) [BR:
lbp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbp03400
]
V1224_06465 (radA)
DNA repair and recombination proteins [BR:
lbp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
V1224_06465 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
DUF7125
AAA_16
AAA_24
nSTAND_NTPase5
nSTAND3
Rad51
NTPase_1
GvpD_P-loop
AAA
AAA_14
SLFN-g3_helicase
AAA_22
NPHP3_N
CbiA
RecA_N
AAA_5
ATPase_2
NACHT
DAP3
ABC_tran
KTI12
AAA_33
zf-RING_10
MCM
AAA_30
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WWR17070
LinkDB
All DBs
Position
1288098..1289483
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AA seq
461 aa
AA seq
DB search
MAKGKTATVFFCQECGYESSKWMGQCPGCRQWNTFVEETVSTTSKAASGSGKKASKEGQE
PSSLSAIVMEEEERMGTHIQELDRVLGGGIVPGSLILVGGDPGIGKSTLLLQVCRYLSDD
GRKVLYISGEESLKQIKLRAMRIGEFTDDLLLLCETNLAVIEEIIARQKPAAVVIDSIQT
MYRDEVSAAPGSVSQVREATGILLRLAKDMGISVFIVGHVTKEGTVAGPRVLEHMVDTVL
YFEGDRHASYRILRGVKNRFGSTNEIGVFEMRQSGLTEVANASEFMLNGRPQGASGSVVV
CSMEGTRPILLEIQALVCRSNFGIPKRQATGTDFNRVGLLMAVLEKRVGLPMSNCDAYVN
IAGGIRMMEPAIDLGIAMAVVSSFQNKPVNEKTVVFGEIGLSGEVRSVSMAEQRITESAK
LGFTECILPRSAEETLRASGSIPKEITLKGVSSVQEAIRLM
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaggaaaaacagcgacagtatttttctgtcaggagtgcgggtatgagtcgtcg
aaatggatgggacagtgcccgggctgcagacagtggaatacattcgtggaagagacagtc
tcgacaacttcaaaggcagcgtcaggcagtggaaagaaggcttctaaggaaggacaggag
ccttcttctttgtctgcgattgtgatggaagaggaagagcggatgggcacacatatacag
gaattggaccgggtgctgggtggtggtatcgtgcccggttctctgattctggtaggtggt
gatccggggattggaaagtccaccttgcttctccaggtgtgcagatatttgtcagacgac
ggccggaaggtactttatatttccggggaggaatctttgaagcagatcaagctccgtgcc
atgcgcatcggtgagtttacggatgatctgctgctactttgcgagacgaatctggcagtc
attgaggagatcatcgccagacaaaagccggcggcggttgtgatcgattccattcagacg
atgtaccgggatgaagtgtcagcggcgccaggcagtgtgtcacaggtcagggaggctacg
ggaattttgctgcgtctggcaaaggatatggggatttccgtctttatcgtaggtcacgtg
acaaaggaaggaacagtggccggtcccagagtgctggaacatatggtagatacggtactc
tattttgagggagaccggcatgcctcttatcgaatcctgcggggcgtaaagaatcggttc
ggttccaccaatgaaatcggtgtgtttgagatgcggcaaagcggtctgactgaggtggcg
aatgcctcggaatttatgttaaatggcaggccgcagggagccagcggcagtgtggttgtc
tgctcaatggagggaacaagaccaatcctcctggagattcaggcgctcgtatgcaggagc
aatttcggtatcccgaaaagacaggcgacgggcaccgattttaaccgggtaggcctcttg
atggcagttctggaaaaaagggttggtctgccgatgtcgaactgcgatgcctatgtgaac
attgccggggggattcggatgatggagccagcgattgatctgggtattgccatggcagtc
gtgtccagttttcaaaacaagccggtcaacgagaaaaccgtcgtatttggagagatcgga
ttaagcggcgaggtgcgctccgtgagcatggcggaacagcgcatcacagagtcagccaag
ctcgggttcacggaatgtatcctgcccagatcggcggaagaaacattgcgcgcttccggg
agtataccaaaagagatcacgctcaaaggcgtctccagtgtccaggaggcaattcggctg
atgtaa
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