Lachnospiraceae bacterium JLR.KK008: V1224_06640
Help
Entry
V1224_06640 CDS
T10585
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lbp Lachnospiraceae bacterium JLR.KK008
Pathway
lbp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V1224_06640 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbp03400
]
V1224_06640 (mutM)
Enzymes [BR:
lbp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
V1224_06640 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
V1224_06640 (mutM)
DNA repair and recombination proteins [BR:
lbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V1224_06640 (mutM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
zf-FPG_IleRS
Ribosomal_S13
ITAM
Lar_restr_allev
Phage_XkdX
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
WWR17100
LinkDB
All DBs
Position
1320622..1321476
Genome browser
AA seq
284 aa
AA seq
DB search
MPELPEVETIRRTIEPQIQGLTVEEVTIRRTEVSAYPAADEFCRRMAGQTISGMSRRGKF
LTIVLESGDRVILHLRMTGCLLLTPAGYPEEKHTHIIFHLCGGKELRFADMRRFGRFWLL
RKGEDDTYSGIGKLGLEPFDASLTAEYLHTCLGKRRKTVKECLLEQTTVAGIGNIYADEI
LFTAGIHPARSADDLRTEEWERLAAVIPERLSYFIEKNHITPEEYLETKGRDYRNTPFLQ
VYGHAGEPCPVCGNRLCRLVIGGRGSVHCTVCQNRESRRQIVAE
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccagaagtagagacgatcaggagaacgatcgaaccgcagatacagggg
cttacagtcgaagaggtaacaatcagacggacggaagtctccgcctatccggcggcagat
gagttttgcaggaggatggcaggacagaccatatcgggcatgtcgcgcagaggaaagttt
ctgaccattgtattagaaagcggtgatcgtgtgatattgcacctgcggatgacaggctgt
ctgctgcttactccggcggggtatccggaagaaaagcatacccatatcatttttcacctg
tgcggcgggaaagagctgcgttttgccgatatgcgccgcttcggacgcttctggctgctt
cggaagggagaagacgatacatacagcgggatcggtaagctggggctggaaccgtttgat
gcgtctctgacggctgaatatctgcatacatgtctgggaaaacgacgcaaaacggtcaag
gaatgtctgctggaacagacgacggttgcgggaatcggcaatatctatgcagatgaaatc
ttatttacggcaggtatccatccggcgcgctctgcagacgatctgcggacggaagaatgg
gagcgccttgcggccgtcattcccgaacggctttcttattttatagagaaaaatcatatt
acaccggaagaatatctggagacgaaagggagagactaccgcaacactccgtttttgcaa
gtctacggtcatgcgggcgaaccctgtccggtctgcgggaacagactctgccggcttgtg
attggcggcaggggcagtgtgcactgcaccgtctgccagaacagggaaagcaggcggcaa
atagtggcggagtaa
DBGET
integrated database retrieval system
