Lachnospiraceae bacterium JLR.KK008: V1224_07170
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Entry
V1224_07170 CDS
T10585
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lbp Lachnospiraceae bacterium JLR.KK008
Pathway
lbp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V1224_07170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbp03400
]
V1224_07170
Enzymes [BR:
lbp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
V1224_07170
DNA repair and recombination proteins [BR:
lbp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V1224_07170
Prokaryotic type
V1224_07170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
WWR17197
LinkDB
All DBs
Position
1428559..1429233
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AA seq
224 aa
AA seq
DB search
MPPISNDWLEPLKNEFSKPYYKKLHEKVVEEYNSRKIFPAADDIFNAFHLTPLHEVKVVI
LGQDPYHNDGQAHGLCFSVKPEMEIPPSLVNIYQELHDDLGCKIPNNGYLVKWAKQGVLM
LNTVLTVRAHMANSHRGIGWEEFTDAAIRILNEQNRPIVFILWGRPAQMKKSMLHNSGHL
ILEAPHPSPLSAYRGFFGSKPFSKTNAFLRENGLSEIDWQIEDV
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaatttcaaatgactggttggaaccgttaaaaaatgaattttccaaaccgtat
tacaagaaacttcatgagaaggttgtggaggagtacaacagcaggaaaatttttccggcg
gcagacgatattttcaatgcatttcatctgacaccgctgcatgaagtgaaggtcgtcata
ctgggacaggatccttatcataatgacggacaggcacatgggctgtgtttttcagtcaag
cccgagatggagattccgccgtcgcttgtaaatatatatcaggaattacacgatgatctg
gggtgtaagatccccaataacggttaccttgtgaaatgggcaaagcagggtgtactgatg
ctgaatacggtactgacagtccgtgcgcatatggcgaattcacacagagggatcggctgg
gaagaattcacggatgcagccatccgcattttgaatgagcagaacaggccgatcgtgttt
atcctgtggggacgaccggctcagatgaagaagagcatgctgcacaattccgggcatctg
attctggaggcgccgcatccgagtccgctttctgcatacagagggttttttggcagcaaa
ccgtttagcaaaaccaatgctttcttgcgggaaaacggtttgtctgagattgactggcag
attgaagatgtataa
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