Lachnospiraceae bacterium JLR.KK008: V1224_08425
Help
Entry
V1224_08425 CDS
T10585
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lbp Lachnospiraceae bacterium JLR.KK008
Brite
KEGG Orthology (KO) [BR:
lbp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbp03032
]
V1224_08425
03400 DNA repair and recombination proteins [BR:
lbp03400
]
V1224_08425
Enzymes [BR:
lbp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
V1224_08425
DNA replication proteins [BR:
lbp03032
]
Prokaryotic type
DNA Topoisomerases
V1224_08425
DNA repair and recombination proteins [BR:
lbp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
V1224_08425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
WWR14533
LinkDB
All DBs
Position
1647351..1649588
Genome browser
AA seq
745 aa
AA seq
DB search
MNDRIIKTEYSEVMQKSYIDYAMSVIIARALPDVRDGLKPVQRRTLYDMHELGIRYDRPY
RKSARIVGDTMGKYHPHGDSSIYEALVVMTQEFKKGLPLIDGHGNFGNIEGDGAAAMRYT
EARLAKITQEAFLADLDKDVVDFIPNFDETEKEPSVLPVKIPNLLVNGAEGIAVGMATSI
PPHNLGEIIDAMKAYMQDEYIATAALLRYVKGPDFPTGGIVINKSDLLSVYETGTGKIRI
RGKVETEKGRAGRINLVITEIPYPMIGGGIAKFLSDVAALAETKKTQDIVDISNQSSKEG
IRIVIELKKDTDVENFKNMLYKKTRLEDTFGVNMLAIAGGRPETMGLREIIRANVNFQFE
VATRKYTTLLAREQEKKEIQEGLIKACNVIDLIIEILRGSRDRAMAKACLVEGKTDGIKF
KSRESKVMAQMLRFSDRQAAAILEMRLYKLIGLEIDALVKEHEETLANIYRYEDILERRD
SMAQVIMNELDAIKKEYAKKRRTVVEDGKEAVFEEKKTEEMEVIFLMDRFGYAKVVDVST
YERNKEAADAEHVYVFSCKNTGRICLFTNTGTLHTIKVIDLPFGKFRDKGIPIDNVSNYN
SSEENIIFMTGQTELNLYRVIFVTKFSMVKIVDGGEFDVMKRTVAATKLQEGDEVISIAV
LREQKDMVLQSKDGYFLRFSLEEIPEKKKGAIGVRGMRLSEQDVIEAVYYTENMTDTVVP
YRNKSLELHKLRSGKRDTKGVKVRV
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacagaattataaaaaccgaatattcggaagtgatgcaaaagtcctatattgac
tatgccatgagtgtaatcatcgccagggcgcttcccgatgtgagggacggtctcaaacct
gttcagcggcgcacgctctatgatatgcacgaactcggaatccgctatgacaggccctac
aggaagagtgcccgtatcgtcggcgatacgatgggtaaatatcatccgcacggcgacagc
tcgatctatgaagcgctcgttgtgatgacacaggaatttaaaaaaggactgccgctgatc
gacggccatggcaatttcggcaatatcgagggagacggtgcggcggccatgcgttatacg
gaggccagactggcaaagatcacgcaggaggcgtttctggccgatctggataaagacgtc
gtcgattttattcccaactttgatgagacggagaaagaaccgtccgtacttccggtgaaa
attcccaatctgctcgtcaatggagcggaagggatcgccgtcggtatggcgacgagcatc
ccgcctcacaatctcggggagatcatcgacgccatgaaagcctatatgcaggatgaatat
atcgccacggcggcgttgctcagatacgtgaaggggccggattttccgaccggcggcatt
gtcatcaacaagtccgaccttttgtctgtctatgagacaggtacaggcaagatccgcatc
cgcgggaaagtggagacggaaaagggcagggcaggcaggatcaatcttgttattaccgag
attccctacccgatgatcggcggcggtatcgccaaatttctgtccgatgtggcggcgctg
gcggagacaaagaagacgcaggacattgtcgacatctccaatcagtcgtccaaagaggga
atccgcatcgtcatcgagctcaaaaaagataccgatgtggaaaactttaaaaacatgctc
tacaaaaagacccgtctggaagacacattcggtgtcaatatgctggccattgccggcggc
cggccggagacgatggggctgagagagattatcagggccaatgtaaacttccagttcgaa
gtggccacaaggaaatatacgacactgctggccagagagcaggaaaagaaagagattcag
gagggcctgatcaaagcctgcaatgtgatcgacctgatcattgagatattaagaggttcg
cgggatcgggcgatggcgaaagcctgtctcgtggaagggaagaccgacgggattaaattc
aaatcccgggagtcgaaagtgatggcgcagatgctgcggttttcggaccggcaggcagcc
gccattctggagatgcgtctctataagctgatcggtctggagatcgacgcccttgtgaaa
gaacatgaagagacgctggccaatatataccggtatgaagatattctcgagcgccgggat
tcgatggcccaggttattatgaacgagctggacgctatcaaaaaagaatatgcgaaaaaa
agacggaccgtcgtggaggacggaaaggaagcggtctttgaggaaaaaaagacggaagag
atggaagtcatctttttaatggatcggttcggttatgcgaaagtggtcgacgtctccaca
tacgaacgcaacaaagaggcagcggacgccgaacatgtgtatgtcttttcctgcaagaat
acagggcgcatctgtctgtttaccaataccggaacactgcatacgatcaaggttattgac
ctgccctttggaaaattccgtgataaggggattccgatcgacaatgtgagcaattataat
tcttcggaagagaacatcatcttcatgaccggacagacggaactgaatctctaccgggtt
atctttgtgacgaaattttccatggtcaaaatcgtggacggcggtgaatttgacgtgatg
aagcgtactgtggcggcgaccaaactccaggagggggacgaagtgatcagtatcgctgtc
ctccgggaacagaaggatatggtcttgcagtcaaaagacggatattttctccgtttctct
ctggaagagattcctgagaagaaaaagggcgccatcggcgtacggggaatgcggctgagc
gagcaggatgtgatcgaagccgtctattatacggaaaatatgacggacacggtcgttcct
tacaggaataaaagtctggaactgcataaactgcgttccggtaaacgggataccaaaggt
gttaaagtgagagtatag
DBGET
integrated database retrieval system
