Lachnospiraceae bacterium JLR.KK008: V1224_10770
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Entry
V1224_10770 CDS
T10585
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lbp Lachnospiraceae bacterium JLR.KK008
Pathway
lbp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V1224_10770 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbp03019
]
V1224_10770 (rny)
Messenger RNA biogenesis [BR:
lbp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
V1224_10770 (rny)
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
Ribosomal_S18
Motif
Other DBs
NCBI-ProteinID:
WWR14972
LinkDB
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Position
complement(2146593..2148140)
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AA seq
515 aa
AA seq
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MLSVIVAVVVTLLIAVPVSAGVATSYRKKVVETKIGNAEEKAREIIDEALKTAEAKKREG
LLEIKEESIRTKNELDKEIKERRAEVQRSERRVQQKEENIDKKADSIEKKEAVLTAREEE
LGKMKVEISKLNEQRVQELERISRLTSEQAKDYLLKTVEDEVKHETAMMIKEMESRAKEE
ADKKAKEYVVTAIQKCAADHVSETTISVVQLPNDEMKGRIIGREGRNIRTLETMTGVDLI
IDDTPEAVILSGFDPIRREVARIALEKLIVDGRIHPARIEEMVEKAQKEVEVMIKEEGEA
ATLEVGVHGIHPELVRLLGKMKFRTSYGQNALKHSIEVAQLSGLLAAEMGLDVRLAKRAG
LLHDIGKAVDHEMEGSHIQLGVELCRKYKEGPVVINSVESHHGDVEAQSLIACLIQAADT
ISAARPGARRETVETYTSRLKQLEEITNNFKGVDKSFAIQAGREVRVMVVPDQISDSDMV
LLARDISKQIEAELEYPGQIKVNVIRESRVIDYAK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgcttagtgtaatagtagcagtagttgttacgcttcttattgcggtaccggtgtctgcc
ggagtagctacttcctatcgcaagaaggtagtagagactaagatcggtaatgctgaggaa
aaggcaagagagatcatcgatgaagcgttaaaaactgcggaggctaagaagagggaaggc
ttacttgagattaaggaagagtccattcgtacaaagaatgaacttgataaggagatcaag
gaacgccgtgctgaagtacagcgctctgaaagaagagtccagcagaaagaagagaacatc
gataaaaaagcagattctatcgaaaagaaagaagcagtgttgacagcgagggaagaagaa
cttgggaagatgaaagtagaaatttccaagctcaatgagcaaagagtacaggaacttgaa
cgaatctccagattaacctccgaacaggcaaaagattatttgttgaaaactgtggaagat
gaagtaaaacatgaaacagccatgatgatcaaggagatggaaagccgggctaaggaagag
gcggacaagaaggcgaaggaatatgtagtgactgccattcagaaatgtgccgctgaccat
gtgtccgagacgacgatctccgtagtacaacttcccaatgatgagatgaagggaaggatc
atcggccgggagggcaggaatatccgcactctcgaaacaatgaccggagtggatctgatc
attgacgacacaccggaagccgtgatattatccggttttgatccgatccgcagggaagtt
gcgcgcattgctcttgaaaaactgatcgtagacggacgtatccatccggcaaggatcgaa
gaaatggtggagaaagcgcaaaaagaagtggaagtgatgatcaaggaagagggcgaggct
gctacgctggaagttggcgtacacggcattcatccggaacttgtgagattacttggtaaa
atgaagttcagaacgagttatggtcagaatgcgctcaagcattctatcgaggttgcccag
ttatccggattgctggcagcagaaatgggattggatgtccggctggccaagcgtgcagga
ttgttgcatgacattggaaaagcagtcgatcatgagatggaaggctcccatatacagtta
ggtgttgagctttgcaggaaatataaagaaggccctgtcgtcatcaacagtgtggaatcc
catcatggtgacgtagaggcgcagtctttgatcgcttgccttattcaggcggcggacacg
atttccgcggcgcgtccgggtgccagacgggaaacggtggaaacatatacaagcaggttg
aaacagttagaagaaatcacaaacaatttcaaaggtgtcgacaaatcttttgctattcag
gcaggcagagaggttcgtgtcatggtagttccagatcagatttcggattctgacatggta
cttttagcccgtgatatttccaaacagatagaggcagaactggaatatccgggacaaatc
aaagtcaatgtcatccgcgaatcgcgcgtaatcgattatgcaaagtag
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