Lachnospiraceae bacterium JLR.KK008: V1224_11185
Help
Entry
V1224_11185 CDS
T10585
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
lbp Lachnospiraceae bacterium JLR.KK008
Pathway
lbp00470
D-Amino acid metabolism
lbp00550
Peptidoglycan biosynthesis
lbp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lbp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
V1224_11185 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V1224_11185 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lbp01011
]
V1224_11185 (murD)
Enzymes [BR:
lbp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
V1224_11185 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
lbp01011
]
Precursor biosynthesis
Amino acid ligase
V1224_11185 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
NAD_binding_8
Pyr_redox_2
AlaDh_PNT_C
DAO
FAD_binding_3
FAD_oxidored
Pyr_redox
Pyr_redox_3
GIDA
NAD_binding_7
FAD_binding_2
HI0933_like
3HCDH_N
NAD_Gly3P_dh_N
KARI_N
Shikimate_DH
HcgC
ThiF
Molybdopterin
TrkA_N
GARS_N
Amino_oxidase
Motif
Other DBs
NCBI-ProteinID:
WWR15046
LinkDB
All DBs
Position
complement(2228461..2229822)
Genome browser
AA seq
453 aa
AA seq
DB search
MDLKEKNVLVIGSGISGVAAAQLLYKAGARVILFDGNDRLTVDEIKDKLPAYVNAQIYTG
VLPEEVEKRAQLVVVSPGVPTDTPFIGAFRERKVPVWGEIELAYCQARGKLIAITGTNGK
TTTTALTGQIMRDYMGEVFVVGNIGNPYTLEADHTTDTSVTVAEISSFQLETIYTFRPDV
SAILNITPDHLNRHHTMANYVEVKESIAQNQNKDSRCILNYEDTYTRAFGERTGAQPFYF
SSERRLEQGIYLEGDDIYLADGDEPVKVLNIHEMKLLGVHNVENVMAAVALAHSMGVPLE
SIRETVREFRAVEHRIEYVATKKGVDYYNDSKGTNPDAAIRGIRAMNRPTILIGGGYDKG
SDYDEWIEAFDGKVKWFVLLGQTRDKIAECARAHGFENIIMVDSLEEAVAVCAEKADDGD
AVLLSPACASWGMFPNYEIRGERFKELVSKLED
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaagagaaaaatgtgcttgtcatcggttcgggaatcagcggtgtcgctgcg
gcgcagcttctttacaaggcgggagcccgtgtcattctctttgacggaaatgacaggctg
acagtggatgagatcaaagacaaactgccggcgtatgtgaatgcgcagatttatacgggc
gtactgccggaagaagtggaaaaaagggcgcagcttgtcgttgtcagtccgggcgtgccc
acggatacgccgtttatcggggcgttcagagagaggaaagtcccggtatggggagagatc
gagctggcgtattgtcaggcaagagggaagctgatcgccattaccggtacgaacggaaag
acgacgacgactgcgctgaccggacagattatgcgggactatatgggagaagttttcgtt
gtcggcaatatcggcaatccttatacgctggaggcggatcatacgacggacacttcggtg
acggtggcggagatcagcagcttccagctcgagacgatttatacgttccggccggatgtc
tctgcgattctcaatatcacgccggatcacctgaaccggcatcatacgatggcaaactat
gtggaagtcaaagagtcaatcgcccaaaatcagaataaagacagccggtgcattctgaat
tatgaggatacgtacacacgggcgttcggagagcggacaggagcacagcctttttatttt
tcttctgagcgccggctggagcagggaatctatctggaaggagatgatatttatcttgcc
gatggagacgagccggtaaaagtgttgaatattcatgagatgaagctgctcggcgttcat
aatgtggaaaatgtgatggctgctgtggcgctggctcacagcatgggggtaccgctggag
agcattcgggagacggtcagagaattccgtgcggtggagcacaggatcgagtatgtggcg
acgaaaaaaggcgttgattattataatgattccaaggggacgaatccggatgcggccatc
cggggaatccgggcgatgaaccggcctacgatcctcatcggcggtggttatgataaagga
agcgattacgatgaatggatagaggcttttgacggtaaggtcaaatggtttgtcctcctt
ggacagacaagggataagattgcagaatgtgcgagagcacatggctttgagaacatcatc
atggtggacagtctggaagaggcagtggctgtctgcgccgaaaaagcggatgacggcgat
gccgtactgctttccccggcttgtgccagttgggggatgttccccaattatgaaatcagg
ggtgagagatttaaagaattagtaagtaagctggaggattga
DBGET
integrated database retrieval system
