Lachnospiraceae bacterium JLR.KK008: V1224_11255
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Entry
V1224_11255 CDS
T10585
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lbp Lachnospiraceae bacterium JLR.KK008
Brite
KEGG Orthology (KO) [BR:
lbp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbp03016
]
V1224_11255 (truB)
Enzymes [BR:
lbp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
V1224_11255 (truB)
Transfer RNA biogenesis [BR:
lbp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
V1224_11255 (truB)
Prokaryotic type
V1224_11255 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
WWR17472
LinkDB
All DBs
Position
complement(2246434..2247336)
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AA seq
300 aa
AA seq
DB search
MINGVINVYKEKGYTSHDVVARLRGILKQKKIGHTGTLDPQAEGVLPVCLGNGTKLCDML
TDRRKEYIAEFLFGITTDTQDMTGTVRSRREVRMTEAEAETVIMSFLGGYAQTPPMYSAC
KVGGRRLYELAREGREVERRAREIVIYELEILAMRLPEVKIRVSCSKGTYIRTLCHDIGE
KAGCGASMKSLLRTKAGGFALEDANTLAGIETAQREGKLGQMLVPVEEMFAQLPPITVRE
EFTGAVCNGNPLYLRQVTGRSGWTDGEQAKVYDHEGKFYGIYAFRIMKGRFEPVKMFLDR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtgataaacggagtcatcaatgtatacaaggagaagggctacacttcccatgatgtggta
gccaggctccggggtatcttaaaacagaaaaagatcggacatacggggacgcttgaccca
caggcagaaggcgtgcttcctgtatgtctcggaaacggaacgaaactttgcgatatgctg
acagacagacgaaaggagtatatcgcagagtttttgttcggtatcacgacagatacacag
gatatgacaggaacggtccgttcccggcgggaagtgaggatgacggaggccgaggctgag
accgtcatcatgagctttctcgggggatatgcacagacaccgcctatgtattccgcctgc
aaggtagggggaagacggctgtatgagcttgcgagggagggcagagaggtggaacgcagg
gcgcgggagattgtgatctatgagctggagatccttgccatgcgtctgccggaagtaaaa
atccgtgtaagctgttccaaagggacttatattcgcacgctctgtcatgacataggggag
aaggcagggtgcggcgcttccatgaagagcctgcttcgcacaaaggccggtggatttgca
ctggaagacgcgaacacgcttgccgggatcgagacggctcaaagagaagggaagctgggg
cagatgcttgtcccggtggaggaaatgttcgcgcagcttccgccgatcaccgtcagagaa
gaatttaccggcgccgtttgcaatggaaatccgttgtatttgcggcaggttaccgggcgg
tcgggatggacggacggggaacaggcgaaagtgtatgatcacgaagggaaattttacggt
atttacgccttccggattatgaagggacgttttgaacccgtgaaaatgtttttggacaga
tag
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