Lachnospiraceae bacterium JLR.KK008: V1224_12760
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Entry
V1224_12760 CDS
T10585
Name
(GenBank) GH25 family lysozyme
Organism
lbp Lachnospiraceae bacterium JLR.KK008
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_25
Big_2
Choline_bind_3
SpaA
CILP_8th
K319L-like_PKD
Ig_TMEM132_5th
Choline_bind_1
Y_Y_Y
Big-like
Hfq
Motif
Other DBs
NCBI-ProteinID:
WWR15333
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Position
complement(2547569..2550535)
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AA seq
988 aa
AA seq
DB search
MRKDFDDELDFLDELELDKHTKDKKKSKAKYDAGHRDEGKRTRTAKMTSEKAPRAKKSSA
AASKKKRRKKENFLMLFWENICGTAAEMSAGDRIIVSTGVIVLVMAIITGSVYVSAKSMD
DQVAAFAELGEDLGAVSLTGESGLIAVTDAEVAAMNSEMLEETEETEETEEETEEEAVEN
EVLLNLTSVQRDLKIKFMNRAGGKLISGIKFQASVKGPDGKTVTYEDDDKDGIIYKTELT
PGKYEVAIVETDGLDGYKYSTAPVSVTVKDKIEYKQIDVADEIKTEAQINVAKEDTAVQE
PESAPALKDTVEWVESTKTAIGSDGTEGSGAEYEEIDKKDIPDPSASVRGRSLFRAMTLE
GGDEVTGSDQSKETEMPPEETEPTEPAEPEKPTEPEKPAEKPTEPEKPAEKPTEPEKPAE
KPKDPEKPAEPEKPAEPEKPAAKVTAVTISGASEIKIGGSVALSAKVEGENLSDGDKGVN
WSSSDKAVATVDGSGKVTGLKEGTVTISAISAKDSNVKATCSITVKKDAVTVTLNQNELS
IPVGSTATLTATTSKGTVNWSSDNDKIVKVENGKVTAVAEGTAVVKAVSAEDSNVSAVCK
VTVTKASALTVTLDTESVKLYTENTKELKATATNANGAVTYSFAVDKKEIAKVESNAEKA
TVTGLEAGEAVLTVTAKDAGGASATATCKLTVTLNPKKDTTAKLKDKDGNQLYIKNKKGE
YVEAVLADYYTADKFYKKLENVKYKYTGWQTIDGKTYYYDKNGNPVTGEQIIQGAKYVFG
SDGALATNSSSGIMGIDVSKWNGTIDWTAVKNSGVNYVIIRCGYRGSSTGALIQDPKFKA
NIQGAAAAGIKVGVYFFTQAVNEVEAVEEASMVLNLIKGHKLSYPVFIDVESSGGRADGL
DRNTRTAVVNAFCRTIQNGGYTAGIYANKTWFESKMNTASLSGYKIWLAQYAAAPTYKAT
RYDMWQYTSKGKVSGISGNVDMNLSYMG
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagattttgacgatgaattagattttttggacgagttagagctcgataaacat
acaaaagataaaaagaaatccaaagcgaagtatgatgccgggcaccgggatgaggggaag
agaaccaggacggcaaaaatgacgtctgagaaagcgccacgtgcgaagaaaagcagtgca
gccgcatcgaaaaagaaaagacggaaaaaagaaaatttcctgatgctgttctgggaaaat
atctgtgggactgcagctgagatgagcgcaggggacaggattattgtctccacaggggtg
atcgtacttgtgatggcgatcattacgggaagcgtttatgtgtcggcgaagagcatggac
gatcaggtagcggcttttgcggagctgggagaagatctgggggcagtcagtctgaccgga
gagagtggtctgatcgccgtaacggatgcggaagtggcagccatgaattcggagatgctc
gaagagacagaggaaacagaagagaccgaagaggagacggaagaagaggcagtggaaaac
gaagtgctgctcaatctcacttccgtacagagagacttaaagatcaagtttatgaaccgt
gccggcggcaaactgatctccggcatcaagttccaggccagcgtcaaaggcccggacggc
aagaccgtcacctatgaggatgatgacaaagacggtattatctataagacggaactgacg
ccggggaaatatgaagtggcgattgtggagacggacggtctggacggttacaagtattcg
acagcgcccgtcagcgttacggtaaaagataagattgaatataagcagatcgacgtggcg
gatgagatcaagacagaggctcagattaatgtggccaaggaagatacggccgtgcaggag
ccggagtccgcaccggcgctgaaagataccgtggagtgggtggagtctaccaaaacggcg
atcggcagcgacgggacagagggaagcggcgcggaatatgaagagatcgacaagaaggat
ataccggatccttccgcatccgtgagaggaagaagcctgtttcgggcaatgacactggaa
ggcggggacgaagtcacaggcagcgaccagtcaaaagagactgagatgccgccggaagag
acggagccaacggaaccggcagagccggagaaaccgacagaaccggaaaagccggcagag
aaaccgacggaaccggaaaaaccggcagagaaaccaacggaaccggaaaaaccagcggag
aaaccgaaagatccggaaaagccggcagaaccggagaaaccggcggagccggaaaaacct
gcggcgaaagtgacggcagtgacgatctccggggcatcggagatcaagattggcggttcg
gtagctctttctgcaaaagtagagggagaaaatctctctgacggggacaaaggcgtcaac
tggagcagcagcgataaggcagtcgctacggtggacggctccggcaaagtgaccggatta
aaagagggcacggtgacgatcagcgctatctccgcaaaggacagtaatgtcaaagcgact
tgcagcattacagtcaaaaaggatgcggtcacagtgacgctgaaccagaatgaattgtca
atcccggtcggaagcacggcgactctgacggcgacaacatcaaaaggcaccgtaaactgg
tccagtgacaacgacaagattgtcaaagtggaaaacggtaaagtgacggcggtggcagaa
ggaacggctgtcgttaaggctgtctccgcagaggacagcaatgtgagcgccgtgtgcaaa
gtcacggtcacaaaggccagcgcattgactgttacactggatacggaaagtgtaaaatta
tatacggaaaatacaaaggaactgaaagctacggcaacaaatgcgaatggggctgtcacc
tatagttttgcggtcgataaaaaagagatcgccaaggtggagagcaatgcggaaaaagcg
acagtcaccggtctggaggccggagaggcggttcttaccgtgacggccaaagatgccggc
ggagcgtcggcgacggcgacctgcaagctgacggtcactttaaatccgaaaaaagatacg
acagcgaagttaaaggacaaggacggaaaccagctttacattaaaaacaaaaaaggtgaa
tatgtagaggctgttctggcagactattatacagcggataaattttataaaaaactggaa
aatgtaaaatataaatatacaggatggcagacgatcgacggcaagacgtattattatgac
aaaaacggcaatcctgtcacaggagaacagatcattcagggtgccaaatatgtatttggc
agcgacggagcattggcaacaaattccagttctggtataatgggtattgacgtatctaaa
tggaatggcacgatcgactggacagcggtaaaaaattccggcgtcaattatgtgatcatt
cgctgcggataccgtggttcttccacgggcgcactcatccaggacccgaaattcaaggcc
aatatccagggtgcggcggcggccggcatcaaagtcggcgtatatttcttcacacaggct
gtcaacgaagttgaggcggtagaggaagcatccatggtgctcaacttgatcaaagggcat
aagctctcctatccggtctttatcgatgtggaatcgagcggaggacgcgcggacggactg
gacagaaatacaaggaccgcagtcgtcaatgccttttgcaggacgatccagaacggcggc
tatacggcgggtatctatgccaataagacatggtttgagagcaagatgaatactgcttct
ctcagcggttacaagatctggctggcacagtatgcggcggcgccgacttataaagccacg
agatatgatatgtggcagtatacgtccaaaggaaaggtaagcggaatcagcggaaatgtg
gatatgaatctcagctatatgggttaa
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