KEGG   Lachnospiraceae bacterium JLR.KK008: V1224_13810
Entry
V1224_13810       CDS       T10585                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
lbp  Lachnospiraceae bacterium JLR.KK008
Pathway
lbp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lbp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    V1224_13810 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lbp03400]
    V1224_13810 (uvrB)
DNA repair and recombination proteins [BR:lbp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     V1224_13810 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      V1224_13810 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 NAGLU_C Kinesin DUF87 AAA_22 SWI2_SNF2 Mal_decarbox_Al AAA_16 Met_synt_B12 fvmX5 AAA_5 FlaG
Other DBs
NCBI-ProteinID: WWR15534
LinkDB
Position
complement(2801246..2803318)
AA seq 690 aa
MPDKRGNSQSADSGQLLARKSSPKDERAFKLHAPYQPTGDQPQAIEALVNGFRKGNQFQT
LLGVTGSGKTFTMANIIAALNKPTLVIAHNKTLAGQLYGEFKEFFPENAVEYFVSYYDYY
QPEAYVPSTDTYIAKDSSINDEIDKLRLSATASLTERRDVVVVASVSCIYGLGSPDDYQE
MIVSLRPGMVKDRDAVIHELINIQYNRNDMDIGRCNFRVRGDTVEIYPAQGGDYLLRVEF
FGDEIDRIAEVDILSGKVHSYLEHIAIFPASHYVVPQEKINRACGTIEKELEERVRYFKG
EDKLLEAQRISERTNFDIEMLRETGFCSGIENYSRHLSDLPAGVPPMTLMDYFKDDYLII
IDESHMTIPQIGAMYSGDRSRKMTLVDYGFRLPSALDNRPLAFQEFEEHIDQMLFVSATP
SKYEEEHELLRTEQIIRPTGLLDPEIVVRPVEGQIDDLIAEVRKETDRKNKILITTLTKR
MAEDLTDYMREVGIRVKYLHSDIDTLERAEIIRDMRLDVFDVLVGINLLREGLDIPEISL
VAILDADKEGFLRSETSLIQTVGRAARNADGHVIMYADTITDSMRAAIEETERRRKIQQD
YNNAHGITPQTIRKAVRDLISISREVAKEETAFTKDPESMDREELEKLAADLQKKMKKAA
AELNFEAAAELRDQLIELKKHLLELEKEDE
NT seq 2073 nt   +upstreamnt  +downstreamnt
atgccagataaaagaggaaattcgcaatccgctgacagcggtcagctactagctcgtaaa
agcagcccaaaagacgagcgtgcttttaaattacatgccccataccagcctaccggcgac
cagccgcaggccatagaagccttggtcaatgggtttcgcaaagggaatcagtttcagacg
ttgcttggcgttaccgggtcagggaagacgtttacgatggcaaatatcattgcggcgctc
aataagcctacgctcgttattgcccacaacaagacactggcgggacagctttacggcgag
ttcaaggagttcttccctgagaatgcggtagaatattttgtctcctattacgattattat
cagccggaagcctatgtgccgagtaccgacacatatattgccaaagattcctccatcaat
gatgagatcgataaactgcggctttcagccactgcgtccctgacggagcgcagagatgtg
gtcgtggtggccagcgtttcctgtatctatggcctcggcagtccggacgattatcaggag
atgatcgtatccctgcgtcccggtatggtgaaagacagagatgctgtcattcatgagctg
atcaatattcaatacaatcgcaatgacatggacatcgggcgctgcaatttccgtgtccgg
ggtgatacggtagagatctacccggcgcagggcggcgactatctgctccgtgttgagttt
ttcggagatgagatcgaccggattgcggaagtggacattctgtcgggaaaagtacattcc
tatctggagcacattgcgatctttccggcgtctcattatgtcgtgccgcaggagaagatc
aacagggcgtgcggcacgattgagaaagaactggaagagcgggtccgctattttaaggga
gaggacaagctgctggaggcgcagcgcatttctgagcggacaaactttgacatagaaatg
ttgcgggagacaggtttttgctccggcattgaaaattattcgagacatttgagcgatctg
ccggcgggggtgccgccaatgacgctgatggattattttaaggatgattatctgatcatc
atcgacgaatcgcatatgacgattccgcagatcggcgccatgtattcgggcgaccgttcg
agaaagatgacgctggtagattacgggttccgtctgccctccgcgctggataaccggccg
cttgcttttcaggagtttgaggaacatatcgatcagatgctgtttgtctcagcgacgccg
tcgaaatatgaagaagaacacgagctgctgcggacagaacagattatccgtccgaccggt
cttctggacccggagattgtcgtccgaccggtggaagggcagatcgatgatctgatcgca
gaggtcagaaaagagacggacagaaaaaacaagatactgatcacgacactgacaaaacgg
atggcggaagacctgacagactatatgcgggaagtcggtatccgggtcaagtatctccac
tcagatattgatacgctggaacgggcggagattatccgcgacatgcggcttgacgtgttc
gatgtattggtgggcatcaatcttctccgcgaggggctggacattccggagatttcgctg
gtggcgatcctggatgcggacaaggagggatttctgcgttcagagacatcgctcatacag
acagtggggcgcgcggcgagaaacgcggacgggcacgttatcatgtatgcggatacgatc
acagactccatgcgggccgccattgaggagaccgagagaagaagaaagatccagcaggat
tataacaatgcgcatggcatcaccccgcagacgatcagaaaagcagtccgcgacctgatc
agtatatcgagagaagtggcgaaggaagaaacggctttcacgaaagacccggagtccatg
gaccgcgaggaactggaaaagctggcggcagatttgcagaagaagatgaaaaaggcggcg
gcggaattgaacttcgaggctgcggcagagctgcgtgatcagttgatcgagctgaaaaaa
catttgctggagttggagaaagaagatgagtga

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