Lachnospiraceae bacterium JLR.KK008: V1224_13810
Help
Entry
V1224_13810 CDS
T10585
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
lbp Lachnospiraceae bacterium JLR.KK008
Pathway
lbp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
V1224_13810 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbp03400
]
V1224_13810 (uvrB)
DNA repair and recombination proteins [BR:
lbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V1224_13810 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
V1224_13810 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
NAGLU_C
Kinesin
DUF87
AAA_22
SWI2_SNF2
Mal_decarbox_Al
AAA_16
Met_synt_B12
fvmX5
AAA_5
FlaG
Motif
Other DBs
NCBI-ProteinID:
WWR15534
LinkDB
All DBs
Position
complement(2801246..2803318)
Genome browser
AA seq
690 aa
AA seq
DB search
MPDKRGNSQSADSGQLLARKSSPKDERAFKLHAPYQPTGDQPQAIEALVNGFRKGNQFQT
LLGVTGSGKTFTMANIIAALNKPTLVIAHNKTLAGQLYGEFKEFFPENAVEYFVSYYDYY
QPEAYVPSTDTYIAKDSSINDEIDKLRLSATASLTERRDVVVVASVSCIYGLGSPDDYQE
MIVSLRPGMVKDRDAVIHELINIQYNRNDMDIGRCNFRVRGDTVEIYPAQGGDYLLRVEF
FGDEIDRIAEVDILSGKVHSYLEHIAIFPASHYVVPQEKINRACGTIEKELEERVRYFKG
EDKLLEAQRISERTNFDIEMLRETGFCSGIENYSRHLSDLPAGVPPMTLMDYFKDDYLII
IDESHMTIPQIGAMYSGDRSRKMTLVDYGFRLPSALDNRPLAFQEFEEHIDQMLFVSATP
SKYEEEHELLRTEQIIRPTGLLDPEIVVRPVEGQIDDLIAEVRKETDRKNKILITTLTKR
MAEDLTDYMREVGIRVKYLHSDIDTLERAEIIRDMRLDVFDVLVGINLLREGLDIPEISL
VAILDADKEGFLRSETSLIQTVGRAARNADGHVIMYADTITDSMRAAIEETERRRKIQQD
YNNAHGITPQTIRKAVRDLISISREVAKEETAFTKDPESMDREELEKLAADLQKKMKKAA
AELNFEAAAELRDQLIELKKHLLELEKEDE
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgccagataaaagaggaaattcgcaatccgctgacagcggtcagctactagctcgtaaa
agcagcccaaaagacgagcgtgcttttaaattacatgccccataccagcctaccggcgac
cagccgcaggccatagaagccttggtcaatgggtttcgcaaagggaatcagtttcagacg
ttgcttggcgttaccgggtcagggaagacgtttacgatggcaaatatcattgcggcgctc
aataagcctacgctcgttattgcccacaacaagacactggcgggacagctttacggcgag
ttcaaggagttcttccctgagaatgcggtagaatattttgtctcctattacgattattat
cagccggaagcctatgtgccgagtaccgacacatatattgccaaagattcctccatcaat
gatgagatcgataaactgcggctttcagccactgcgtccctgacggagcgcagagatgtg
gtcgtggtggccagcgtttcctgtatctatggcctcggcagtccggacgattatcaggag
atgatcgtatccctgcgtcccggtatggtgaaagacagagatgctgtcattcatgagctg
atcaatattcaatacaatcgcaatgacatggacatcgggcgctgcaatttccgtgtccgg
ggtgatacggtagagatctacccggcgcagggcggcgactatctgctccgtgttgagttt
ttcggagatgagatcgaccggattgcggaagtggacattctgtcgggaaaagtacattcc
tatctggagcacattgcgatctttccggcgtctcattatgtcgtgccgcaggagaagatc
aacagggcgtgcggcacgattgagaaagaactggaagagcgggtccgctattttaaggga
gaggacaagctgctggaggcgcagcgcatttctgagcggacaaactttgacatagaaatg
ttgcgggagacaggtttttgctccggcattgaaaattattcgagacatttgagcgatctg
ccggcgggggtgccgccaatgacgctgatggattattttaaggatgattatctgatcatc
atcgacgaatcgcatatgacgattccgcagatcggcgccatgtattcgggcgaccgttcg
agaaagatgacgctggtagattacgggttccgtctgccctccgcgctggataaccggccg
cttgcttttcaggagtttgaggaacatatcgatcagatgctgtttgtctcagcgacgccg
tcgaaatatgaagaagaacacgagctgctgcggacagaacagattatccgtccgaccggt
cttctggacccggagattgtcgtccgaccggtggaagggcagatcgatgatctgatcgca
gaggtcagaaaagagacggacagaaaaaacaagatactgatcacgacactgacaaaacgg
atggcggaagacctgacagactatatgcgggaagtcggtatccgggtcaagtatctccac
tcagatattgatacgctggaacgggcggagattatccgcgacatgcggcttgacgtgttc
gatgtattggtgggcatcaatcttctccgcgaggggctggacattccggagatttcgctg
gtggcgatcctggatgcggacaaggagggatttctgcgttcagagacatcgctcatacag
acagtggggcgcgcggcgagaaacgcggacgggcacgttatcatgtatgcggatacgatc
acagactccatgcgggccgccattgaggagaccgagagaagaagaaagatccagcaggat
tataacaatgcgcatggcatcaccccgcagacgatcagaaaagcagtccgcgacctgatc
agtatatcgagagaagtggcgaaggaagaaacggctttcacgaaagacccggagtccatg
gaccgcgaggaactggaaaagctggcggcagatttgcagaagaagatgaaaaaggcggcg
gcggaattgaacttcgaggctgcggcagagctgcgtgatcagttgatcgagctgaaaaaa
catttgctggagttggagaaagaagatgagtga
DBGET
integrated database retrieval system