Lachnospiraceae bacterium JLR.KK008: V1224_14235
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Entry
V1224_14235 CDS
T10585
Symbol
abc-f
Name
(GenBank) ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
lbp Lachnospiraceae bacterium JLR.KK008
Pathway
lbp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lbp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
V1224_14235 (abc-f)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lbp02000
]
V1224_14235 (abc-f)
01504 Antimicrobial resistance genes [BR:
lbp01504
]
V1224_14235 (abc-f)
Transporters [BR:
lbp02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
V1224_14235 (abc-f)
Antimicrobial resistance genes [BR:
lbp01504
]
Gene variants
Macrolide resistance genes
Transporters
V1224_14235 (abc-f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
KAP_NTPase
AAA_29
Dynamin_N
MMR_HSR1
NACHT
AAA_18
Motif
Other DBs
NCBI-ProteinID:
WWR15616
LinkDB
All DBs
Position
complement(2890071..2891531)
Genome browser
AA seq
486 aa
AA seq
DB search
MSMIKVDGLTFSYPTSYDNVFEDVSFQIDTDWKLGFVGRNGRGKTTFLNLLLGKYEYGGT
ITCSSEFDYFPYQVNDQSRLTVEVLQEICPLAQEWELMRELSCLEVDEETLWRPFETLSN
GEQTKVLLASLFLNEGHYLLIDEPTNHLDIRARQMVSAYLKKKKGFILVSHDRCFLDGCV
DHILSLNRADIVVRGGDFSSWLTDFERQQQYEAAENIRLQKDIRRLKQSSRRSAGWSEQV
EASKIGAADKGYVGHKAAKMMKRSKVIEARQEEAVRQKSALLKNVETAVDLKLCPLSYHA
DTLVSFSEVSVCYGEREVCDPVTFTVRRGDRIALDGKNGSGKSSLLKLLTGEAAEFRGSL
KAGSGLVISYVPQDTSYLQGTLTVFAEENRLDESLLKTVLRKLDFERTQFEKDMKEFSAG
QKKKVLIARSLCEQAHLYVWDEPLNFIDIYSRMQIERLIREFSPTMIFVEHDKAFRDTVA
TKLVQL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgatcaaagtagacggccttactttttcatatccgacaagttatgataatgtt
ttcgaagatgtcagttttcagatcgatacagattggaaactggggtttgtgggaaggaac
ggcagagggaaaacgactttcctgaatttattactgggaaaatatgagtatggtggaacg
atcacctgttcgtcagaatttgactattttccttatcaggtgaacgatcaaagccggttg
acagttgaggttcttcaggagatctgcccattggcgcaggaatgggaactgatgcgtgaa
ttgtcctgccttgaggtagacgaggagactttgtggcggccttttgagacactttccaac
ggagagcagacgaaagttttgcttgcgtctctttttttgaacgaagggcattatctgctg
atcgatgagcctaccaatcacctggacatcagggcgagacaaatggtttcagcatattta
aaaaagaaaaaaggatttatactcgtttctcacgaccgttgttttctggatggctgtgtc
gaccatattctgtcgctgaacagggctgacattgtggtgcgaggcggcgacttctcgtcg
tggctcacagattttgaacgacagcagcagtatgaagcagcagaaaatatccgtctgcaa
aaagacatccgccgtttaaagcagtcgtccagacggtcggccggctggtcggagcaggtg
gaagcgtcgaagatcggagcggccgataaagggtatgtaggccacaaagccgctaagatg
atgaagcggtcaaaagtgatagaggcgagacaggaggaagcggtcaggcaaaagtcagcg
ctcctgaaaaacgtggaaacggccgtggatctgaaactctgtccgctctcttatcatgcc
gatacgctcgtctctttttcggaggtttctgtctgttatggggaacgtgaagtctgtgat
ccggttacatttaccgtgcgcagaggggatcggatcgcactggatgggaaaaatggcagc
ggcaagagcagcctgctgaaacttttgacaggggaagcggcagagttcagagggagtctg
aaggcgggttccggccttgtcatctcttatgtgccccaggacacctcttatctgcaggga
acactgacggtgtttgcagaggaaaacaggcttgatgaaagtttgctgaagacagttttg
cgcaaactggatttcgaacgcacgcaatttgaaaaagatatgaaggagttttccgcaggg
cagaagaaaaaagtattgattgccaggagcctgtgtgagcaggcgcatctgtatgtgtgg
gatgagccgttaaattttatcgatatttattcgcgaatgcagatcgaacggctgatcagg
gaattttcaccgacaatgatctttgtggagcacgacaaagcattccgggatacggttgcg
acgaagctggtacagctgtaa
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