Lonsdalea britannica: CKQ53_02145
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Entry
CKQ53_02145 CDS
T05623
Name
(GenBank) carbohydrate diacid regulon transcriptional regulator CdaR
KO
K02647
carbohydrate diacid regulator
Organism
lbq
Lonsdalea britannica
Brite
KEGG Orthology (KO) [BR:
lbq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lbq03000
]
CKQ53_02145
Transcription factors [BR:
lbq03000
]
Prokaryotic type
Helix-turn-helix
Other families
CKQ53_02145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
AXW88733
UniProt:
A0A1X3S386
LinkDB
All DBs
Position
complement(440606..441772)
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AA seq
388 aa
AA seq
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MSDYHFDATLAGAIVARTMQIIECNVNVMDATGRIIGSGDKERIGEIHEGALLALTQERI
VTIDDASMHILQGVKPGINLPLRLDGVIVGVVGLTGQPDGLRQYGELVCMTAEMMLEQAR
LMQLLARNSRQREELVLNLIRSDTYSETVSEWARRLGIDLQKPRVALVVELDSGQLGVST
AMTELQQFQNLLTEPGMASEREEGLMAIVSLTEMVVLQPLSEHGRWDPDAHLRRIQLLYQ
RLHDESPLRVRLALGNFFPGEGGLQRSYQTAKTTMKVGKQRQPDAHCYSYQDMALPVLLD
SLRGGWQANELMQPLRRLRAMDGNGIFRKTLYSWFCYNLQNTVTANALYIHKNTLEYRLH
RISDITGLNLSRVDDRLLLYIALQLEDG
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattaccattttgacgccacgctggccggtgccattgtcgcgcgcacgatgcag
atcatcgaatgcaacgtgaacgtgatggatgcgacggggagaattatcggcagcggcgac
aaggagcgtatcggcgaaattcatgagggcgcgctgttggcgctcacgcaggaacgtatc
gtcaccatcgacgacgcgtccatgcacatcttgcagggcgtgaaacccggcatcaatctt
cctctgcggctcgacggcgtgatcgtcggggtggtgggcttaacgggtcaaccggacgga
ctgcgccagtatggcgaactggtctgcatgacggcggaaatgatgctggagcaggcgcgg
cttatgcagctgctggcgcgcaacagccgtcagcgcgaagagctggtgttgaacctgatc
cgcagcgatacctactccgagacggtcagcgaatgggcgcggcggttggggatagacctg
caaaaaccgcgcgtcgcactggtggtcgagttggacagcggccagttgggcgtcagtacg
gcgatgaccgagctacagcagtttcagaacctgctgacggagccgggcatggcgtcggag
cgggaagaggggctgatggcgatagtctctttgaccgagatggtggtgttgcagccgcta
tccgagcatggccgctgggatcccgacgcgcatctgcggcgtatccagctgttataccag
cgtctgcatgatgaaagccccctgcgggtgcggctggcgttgggcaactttttccccggc
gaaggcggcctgcaacgctcctatcagacggcgaagaccaccatgaaagtgggcaaacag
cgtcagcctgacgcgcattgctacagctatcaggatatggcgctgccggtgctgctggac
agcctgcgcggcggctggcaggccaatgagctgatgcagccgctaagacggctgcgggcg
atggacggcaacgggatctttcgcaaaacgctctacagctggttctgctacaacctgcaa
aacacggtcacggccaacgcgctgtatatccataaaaatacgctggaataccgtttgcac
cgtatctcggacattaccggactgaacctctcccgcgtcgacgaccgcctgttgctgtat
atcgcgctccagctggaagacgggtga
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