KEGG   Lonsdalea britannica: CKQ53_02610
Entry
CKQ53_02610       CDS       T05623                                 
Name
(GenBank) RNA polymerase-binding ATPase
  KO
K03580  ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
lbq  Lonsdalea britannica
Brite
KEGG Orthology (KO) [BR:lbq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lbq03021]
    CKQ53_02610
Transcription machinery [BR:lbq03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     CKQ53_02610
SSDB
Motif
Pfam: RapA_C Tudor_1_RapA Tudor_RapA Helicase_C SNF2-rel_dom ResIII DEAD Cas3-like_C_2 FeS_hyd_N AAA_34
Other DBs
NCBI-ProteinID: AXW85979
UniProt: A0AAD0SDF6
LinkDB
Position
551587..554493
AA seq 968 aa
MPFTLGQRWISDTESELGLGTVVAVDARMVTLLFPASGENRLYSRNDAPITRVMFNPGDT
VTSHEGWQMQVDEVIDENGLRTYIGLRLDDETPALLREVFLDSKLTFNKPQDRLFAGQLD
RMDRFALRYRARQHLHAQALQPWNGLRGMRASLIPHQLYVAHEVGQRHAPRVLLADEVGL
GKTIEAGMIIHQQLLSGRAERVLIVVPETLQHQWLVEMLRRFNLLFSLFDDERYAEALLD
SSNPFETEQLIICSLSFVQRNPKRFEQLANANWDLLVVDEAHHLTWSEAEPSPQYQAIER
LASVTPAVLLLTATPEQLGQESHFARLRLLDPNRFHDYAEFVAEQQRYQPVADAVTQLLT
GDEASPEDLQALTSLLGGQDISELLQAINASDEDAARSAREELITLLMDRHGTSRVLFRN
TRQGVQGFPERQLQTIPLPLPSQYQTAIKVSGIMSGAKTSEKRAQDMLYPEQIYQQFEDE
NATWWSFDPRVEWLLDYLTSHRDEKVLVICAKAASALQLEQALRTREAIRAAVFHEGLSI
LERDRAAAYFASEEEGAQVLICSEIGSEGRNFQFASHLVMFDLPFNPDLLEQRIGRLDRI
GQENDIQILVPYLEQTAQALLVRWYHEGLDAFEHTCPTGRSIYDSHYDRLIGLLAHPEEQ
DGVDDFIRECREQHDALKAQLEQGRDRLLEMHSNGGEQAKKLSTDIAAQDDDVTLVNFAL
NLFDIIGIHQEDRSDNLIVLRPSEHMLVPDFPGLSQDGCTITFDREQALSREDAQFISWE
HPLIRNGLDLILSGDTGSCAVSLLKNKALPVGTLLAELVYVVEAQAPKKLQLTRFLPPTP
VRILLDRKGTDLAAQVEFESFNRQLAAVNRHTASKLVNAVQPDVHDMLQKAEPLVAEQAR
KVIATATQFADKALRHELERLTALKAVNPNIREDELQALETQREQVLLNLEQANWRLDAI
RLVVVSHQ
NT seq 2907 nt   +upstreamnt  +downstreamnt
atgccttttacacttggtcagcgctggatcagcgacacagaaagcgaattaggattggga
acggtagtggcggttgatgccagaatggttaccctgctgttcccagccagcggcgagaat
cgcctctattcccgcaatgatgcccccatcacccgggtcatgttcaatccgggcgatacc
gtcaccagccatgagggttggcagatgcaggtcgacgaagtcatcgacgaaaacggtctg
cgcacgtatatcggcctgcggctcgacgatgaaacgcccgccctgctgcgcgaagtgttt
ctggacagcaaactgactttcaataagccgcaggatcgcctgttcgccggccagcttgac
cggatggatcgctttgctctgcgctatcgcgcccgtcagcacctgcacgctcaggccctg
cagccgtggaacggtttgcgcgggatgcgcgccagcctgatcccccaccagctgtatgtc
gcgcacgaagtcggccagcgccacgcgccgcgcgttctgctggcggatgaagtgggtctg
ggaaaaaccatcgaagccgggatgatcatccatcaacagctgctgtcaggccgtgccgag
cgcgtgctgatcgtggtgccggaaaccttgcagcaccagtggctggtggaaatgctgcgc
cgcttcaacctgctgttctcactgttcgacgacgaacgctacgccgaagcactgctggat
agcagcaacccgttcgaaaccgaacagctgattatctgttcgctgagttttgtccagcgc
aacccgaaacgttttgaacagctggccaacgccaactgggatctgctggtggtcgacgaa
gcgcatcacctcacctggagcgaagccgagccgagcccgcagtatcaggctatcgagcga
ctggcgagtgtcaccccggcggtgctgctgttgaccgcgaccccggaacagctgggtcag
gaaagtcacttcgcccgcctgcgtctgttggatccgaaccgcttccacgactacgccgaa
tttgtggccgagcagcagcgctatcagccggtggccgatgcggtgacccagctgctgacc
ggcgacgaggccagcccggaggatcttcaggcgctgacgtcgctgctgggcggacaggac
atcagcgagctgctgcaagccatcaacgcctcggacgaggatgcagcgcgttcagcacgc
gaagaactcatcaccctgctgatggaccgccacggcaccagccgcgtgctgttccgtaac
acccgtcagggcgtgcagggcttcccggaacgtcagctacagaccatcccgctgccgctg
ccttctcagtatcagacggcgatcaaggtttccggcatcatgtccggcgccaaaacctcc
gagaagcgcgctcaggacatgctgtatcccgagcaaatttatcagcagttcgaagatgaa
aacgccacttggtggagcttcgatccgcgcgtagagtggctgctcgactacctgaccagc
catcgcgatgagaaggtgctggtgatctgcgccaaagccgcctcggcgctgcagttggaa
caggcgctgcgcacgcgggaagccatccgcgccgcggtattccatgaaggtttgtcgatt
ctggaacgcgaccgcgccgccgcctactttgcctcggaagaggaaggcgctcaggtgctg
atctgctccgaaatcggctccgaaggccgcaacttccagttcgccagccatctggtgatg
tttgacctgccgttcaaccctgacctgctggagcagcgcatcgggcgtctggatcgtatc
ggtcaggagaatgacatccagattctggtgccttatttggaacagaccgcgcaggcgctg
ctggtccgttggtatcacgaaggtctggacgcattcgaacatacctgcccgaccggccgc
tcgatttacgacagccattacgatcgtctgatcggtctgctcgctcatccggaagagcag
gacggcgtcgacgactttattcgcgaatgccgtgaacagcacgatgcgctgaaagcccag
ttggaacagggtcgcgaccgcctgctggaaatgcattccaacggcggcgaacaggcgaaa
aagctgtccaccgatatcgccgcgcaggacgacgacgtcacgctggtcaactttgcgctc
aacctgttcgacatcatcggcatccatcaggaagatcgcagcgacaacctgatcgtattg
cgtccgtcggaacatatgctggtgccggacttccccggtttgtctcaggacggctgtacg
atcacctttgatcgcgagcaggcgttgtcccgcgaggatgcgcagttcatcagttgggag
cacccgctcatccgtaacggactggatctgatcctgtccggcgataccggcagctgcgcc
gtatcgctgctgaaaaacaaagcgctgccggtcggcacgctgctggcggaactggtgtat
gtggtagaggcgcaggcgccgaaaaaactgcagctcacccgtttcctgccgccgacgccg
gtacgcatcctgctggatcgcaaaggcaccgatctggccgcgcaggtggagttcgaaagc
ttcaaccgccagctggccgcggtcaaccgccacaccgccagcaaactggtgaacgccgtc
caacctgacgtgcatgacatgctgcaaaaagcggagccgctggtcgccgaacaggcccgg
aaggtgattgcgacggccacccagttcgccgataaagcgctgcggcacgagctggaacgc
ctcacggcgctcaaagcggtcaaccccaacatccgcgaagatgagctacaggcgctggaa
acccagcgggaacaggtgctgctgaatctcgaacaggcaaactggcgtctggacgccatc
cgtctggtcgtggtttcacaccaataa

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