Lonsdalea britannica: CKQ53_03110
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Entry
CKQ53_03110 CDS
T05623
Name
(GenBank) hypothetical protein
Organism
lbq
Lonsdalea britannica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
DUF4595
TEN_YD-shell
OCRE
DUF4112
Motif
Other DBs
NCBI-ProteinID:
AXW86066
UniProt:
A0AAD0SF63
LinkDB
All DBs
Position
complement(671789..676813)
Genome browser
AA seq
1674 aa
AA seq
DB search
MEQTKSATLLSSEEAASQNFSTDNKISGGCVKCGCEVLIYYHYDTGKPVPNAPFVLTDSN
QHVIEGKTDQNGLCLIYDMGCGTFDLLLDEGSDTFEPKETVKNNPVMQSNPAYAAIAGEY
FALFLLLHKQGLVEYDASSSSDRYVDVDGAGLFTSIPPEYRKAYDRFWELDEKINAGSLE
LRRAVNKIQHSLAAEVADKGEGGNAAIMLFCQIILGCIPVVGQAMDAYSIGEWCWDTYEE
PVLLEDKLHVAEGVLNVIGLVPGLGDAMKVSGKAILKALKKVAPEEIQFAMKIIRKLSDG
NLVKGISKMRAELSVYGQKALKLLEDMKAALQKALKSSADDGWIVALMKDRFHKMVDFLD
KLYKTFSDTVAYIERKFDEFIPHVVTRKAGSARSKGSVAEAAEAPKTAPHAESRAGEPAR
AESAPNKPASENAAGDSTVPSSKKPTSKKSEGAGEDASSGAKSEPAPAEKKANATPEGSE
SINAGSSKEPKPDKTSQKKKADEAEGKCDANSNKCHKEGEPVDMATGFVVDWRTDFEVSG
LLPLTMKRYYRSGGERKPGLLGALWRSNWDMCLELEQGVVTLTDGEFNQSTFVLPDEGEF
LRSQANPEWRLSRQQGQLVLIHCDGLRYRFEHAMGKRLLLTSITDRVGHEISLLWERGVL
RWIELPDRRLVHVETEKRRITQLTLCDAQRQPLQTLARYTWDQHGFLLSVRAGDGRNFDY
RYSPEGWLLRWNDLAHTWVEHTYDEKGRSIQDRSSEGFWPGRFEYDDENLTSHYHSGFGG
VVSYTRNERNYILCKRTADGGETHYEWQQSLLVAETDPLGNRTEYEHNDWGQITAVTLPD
GAVHRYDYDDDGQLLAYTNPLGHVWQYQRNAQGQVVEVNDPEGREWLQSYTEQGLLATVI
GPDGVLQRYHYNPQGFVSAIETDNLPAVRFFYDAQDRLTERHIARESGTQIRRWEYEGAR
QAPVRVVYEDGSATHFGYDVEGNLTSVLDALGQQHQFRYGAFDNLLESTDPLGATVRYHY
NTEAEFAGVTNSHGDAWTYSFDECGRLSEERHYDGRVYRYAYDVAGRLTCRTAPDGSQQG
YTHDALGRVTEVQCLTAEGATESVTTLDYDIAGRLLRASNADACVEYAYNRSGQVISERV
NGQEILSDYDASGYRAQVNGLLAPLQQQWQSGRLSALGVGSHQALSFSHTDAGQESLRSN
GAGFALSQSWSETGLLERQTLVNGGGSEPHHLERRYRYDVLDRLVGIKDAHWGEQDFRLN
GNGQVTAERRNGRWRQAKLFGYDSEQNLCEVSEIIAASGVPLSVSQAVSEGQRRYDGAGR
IVERGDVRYEYDACGRLSRKREVRAGFRPKETRYEWDTQDRLRRVSLPDGARWRYGYDAF
GRRVSKVREGQVASLQSVSKVQYQWDGDQLVGQVQYYADGTPAREVQWVYEPGSFRPLAQ
VERKGEETRLHYVVTDVAGTARELCSETGEVHWRGEQGLWNGHREDRLPVGLKRYLGDAA
NEEVYCELRYQGQIYDAETGLYYNRHRYYDADSGQYISPDPIGLAGGLRPQGYVHNPLEW
VDPFGLDKKAGKEVPERGYHNETYAPKPVKPEDAVDKWDEFLGPGPHTNTHPRTGEIDSD
RIVSADGKRSIRYGNHEMGSKPTKHHYHEETWTHDTENNVMNVDNLVVRVPFKK
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atggaacagacgaaatcagcgacgctgctctccagcgaagaggccgcgagtcagaatttt
tctacggacaataaaatctctgggggctgcgtcaaatgcggctgcgaagtcctcatttat
taccactatgacacgggtaaaccggtaccgaatgcgccctttgtattgacggacagcaat
cagcacgtcattgaggggaaaacggaccagaatggcctgtgcctgatctatgacatgggc
tgcgggacatttgatcttttgctggatgaaggctcggacacgttcgaaccgaaagaaacc
gtcaaaaataacccagtcatgcagtccaacccggcgtatgcagcgatagcgggcgaatac
ttcgcgttatttcttctcttgcacaagcaggggctggttgaatatgacgccagcagcagt
agcgacagatacgtggatgtggacggtgcgggtttatttacctctatacctcccgagtac
cgcaaagcctacgatcgcttttgggagctggatgagaaaatcaatgcgggcagtctggaa
ctccgccgggcggtaaataaaatccagcatagtctggcagcagaggtcgcggataagggt
gaaggcggtaatgctgccatcatgctgttttgccagattattttaggctgcatccccgtt
gtcgggcaggcgatggatgcctactctatcggagagtggtgctgggatacgtacgaagag
cccgtgttgctggaagacaaattgcacgtggctgaaggcgtgctcaatgtgatcggcctg
gtgccgggactgggcgacgccatgaaggtcagtggcaaggccattctgaaagcgttgaaa
aaagtggctcccgaagaaattcagttcgccatgaagatcattcgaaaattgtcggatggc
aacctggtgaaaggcatcagtaaaatgcgtgctgagttgagcgtgtatggtcaaaaggca
ttaaaactgttggaggatatgaaggcggcgttgcagaaggcgttgaagtcgtctgcggac
gatggctggattgtcgccctgatgaaagaccgttttcataagatggtcgatttcctcgat
aagttatacaaaacgttcagcgatacggttgcttacattgaacgtaaatttgacgagttc
attccccatgtcgtcacccgcaaagcgggaagcgcacgttctaagggctccgttgctgaa
gctgcggaggctcctaaaacggcgccgcatgctgaaagccgggccggagagcccgctcgg
gcagaaagcgcgccgaataaacccgcgagcgaaaatgccgcaggtgattcgacagtccca
tcatcgaaaaagccgacatccaagaaatctgaaggcgctggcgaagatgcttcttcggga
gccaagtctgagcctgctcccgcagagaaaaaggcgaatgccactcctgaaggtagtgag
tccatcaatgcgggcagtagtaaagaacctaagcccgataaaacatctcaaaagaaaaaa
gcggacgaggcagaagggaaatgtgacgccaatagtaataagtgccacaaagagggggaa
ccggtcgatatggcgaccggtttcgtggtggattggcgcacggattttgaggtttccggc
ctactgcctctgaccatgaaacgctactaccgttctggcggcgagcgtaagccgggttta
ctcggagcgttgtggcgcagcaactgggatatgtgtctggagctggagcaaggcgtggtt
acgctcacggacggtgagttcaaccagtccacttttgtcttaccggatgagggtgaattc
cttcgttctcaggccaatccagaatggcggctttcgcgccagcaagggcaattggttctg
attcattgtgatggtctgcgctatcgctttgaacatgctatgggcaagcggctgctgctg
acatcgatcaccgaccgtgtcggccatgagatctctctgttatgggagcgtggagtatta
cgctggatcgagttgcccgatcgtcgtttggtgcacgtcgagacagagaaacggcgtatc
acccaactgacgttgtgtgacgcacaacgtcagccactacagacgctggcgcgttatacc
tgggatcaacacgggttcttgctcagcgtgcgggcgggtgacgggcgtaatttcgactac
cgttactcacccgaaggctggctactgcgttggaacgatctggcacacacgtgggtggaa
catacctacgatgagaaaggtcgctcaatccaggatcggtcgtcggaaggattctggccc
ggacgtttcgaatatgacgatgagaatctgaccagccattatcacagcggctttggcggc
gtggttagctacacgcgaaatgaacgcaattacattctctgcaaacggacggcggacggg
ggtgaaactcactacgagtggcaacagagtctattggttgccgaaacagacccgctgggg
aatcgcacggaatatgaacacaacgattgggggcagataacggccgtgacgctcccggac
ggggcggttcatcgctacgattacgatgacgacggccaactgctggcgtacaccaatccg
ctgggccatgtctggcagtatcaacgcaacgctcagggacaggtcgtggaggttaacgat
ccagaaggccgcgagtggctgcaaagctatacagagcaagggctactcgccacggtgatt
gggccggacggcgttttgcagcgctatcattacaatccacagggcttcgttagcgctata
gaaaccgacaacctgcccgcggtgcgttttttctatgacgcgcaggaccggttgaccgag
cggcatattgcccgtgagtcagggactcagattcgccgctgggaatatgaaggcgcacgg
caagcacccgttcgcgtcgtctatgaggacggtagcgctacccactttggttatgatgtg
gaaggcaatctgacgtctgtgttggacgcattggggcagcagcaccagttccggtacggc
gcgttcgacaatctgttggagtcgaccgacccactcggcgcaacggtccgttatcactac
aacacggaagccgaattcgccggtgtgaccaacagtcacggcgacgcctggacttactct
tttgacgagtgcggacggctttccgaagagcggcattatgacggacgcgtgtatcgctat
gcctacgacgtggcggggcgattaacgtgtcgaaccgcccccgacggcagccagcaaggc
tacacgcacgacgcgttgggacgggtaacggaagtccagtgcctcaccgctgaaggggcg
acggaaagcgtcaccacgctggactacgacatcgcgggacgcctgttgcgcgccagcaac
gccgatgcctgcgtggagtacgcttataaccgctccggtcaggtcatctccgagcgggtc
aacgggcaggaaatactcagcgattatgatgcgagcggttaccgcgcgcaggtcaatggg
ttgttggcgccgctgcaacagcagtggcaatcagggcggttatcggcgctgggcgtaggt
tcgcatcaggcgttgtcgttcagccatacggacgcgggtcaggaaagcctgcgcagcaac
ggcgcgggcttcgcactgtcgcagagctggagcgagaccgggctgctggagcgtcagacg
ctggtcaacggcggcggcagcgagccgcaccatctggagcgccgctatcgttacgacgtg
ctggaccgtctggtgggaataaaagacgctcactggggcgagcaggatttccgcctgaac
ggcaacgggcaggtgacggcggagcgtcgcaatgggcgctggcgtcaggcgaaactgttc
ggttacgacagcgaacagaacctgtgtgaagtctcggagattatcgccgcctcgggcgtg
ccgctgtcggtatctcaggcggtgtcggagggccagcgtcgctacgacggcgcagggcgt
atcgtcgagcgcggcgacgtgcgctatgagtacgatgcctgcggccggttaagtcgcaag
cgagaggtacgcgcgggattcagaccgaaagaaacgcgctacgagtgggatacgcaggac
cggttgcggcgggtgagcctgccggacggggcgcggtggcgctatggctacgatgcgttc
ggacgccgggtcagcaaggtgcgcgaaggtcaggtggcctcgttgcagtcggtgtcgaag
gtccagtaccagtgggacggcgaccagttggtgggacaggtgcaatactacgccgatggc
accccggcgcgggaagtgcaatgggtgtatgagccgggcagcttccggccgctggcgcag
gtggagcgcaagggagaagagacccgactgcactatgtggtgacggacgtggcgggcacg
gcgcgggagctgtgcagcgagacgggggaagtccactggcgcggtgagcaggggctgtgg
aacggacaccgtgaagaccggctaccggtggggctgaagcgctatctgggcgacgcggca
aacgaagaagtgtactgcgagctgcgttaccaggggcaaatctacgacgcggaaacggga
ctttactacaaccggcatcgttactatgatgcggacagcgggcagtacatctcgccggac
ccgatagggctggcgggtggattgaggccgcaggggtatgtgcataacccgttggagtgg
gttgatccgtttgggttggataaaaaagctggaaaagaagttccagagcgtggttatcat
aatgaaacctatgcaccgaaaccggttaaacccgaagatgctgttgataaatgggatgag
tttttaggccccgggccacatacaaatacacatcctcgtactggtgaaatagattcggat
agaatagtttcggcggatgggaaacggagtataagatatggaaatcatgagatgggaagt
aaacccacgaagcatcattatcatgaagagacatggactcatgatactgagaataatgtt
atgaatgttgataatcttgtagttcgggtgccgtttaagaaataa
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integrated database retrieval system
