Lonsdalea britannica: CKQ53_03945
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Entry
CKQ53_03945 CDS
T05623
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lbq
Lonsdalea britannica
Pathway
lbq03420
Nucleotide excision repair
lbq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lbq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CKQ53_03945
03430 Mismatch repair
CKQ53_03945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbq03400
]
CKQ53_03945
Enzymes [BR:
lbq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CKQ53_03945
DNA repair and recombination proteins [BR:
lbq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CKQ53_03945
MMR (mismatch excision repair)
Other MMR factors
CKQ53_03945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
DUF4391
Motif
Other DBs
NCBI-ProteinID:
AXW86218
UniProt:
A0AAD0SEC2
LinkDB
All DBs
Position
complement(836935..839097)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLDSLNDKQRDAVAAPRSNMLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV
TFTNKAAAEMRHRIEQLIGTSQGGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDSEDQL
RLLKRLVKALNLDEKQWPPRQAMWYINGKKDEGLRPQHIESYGNPVEQTWLRVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRDRFNNILVDEFQDTNRIQYAWVRMLAGDS
ARVMIVGDDDQSIYGWRGAQVENIQHFLNDFPQASTIRLEQNYRSSANILNAANALIAHN
GDRLGKNLWTDGVEGDPISLYCAFNELDEARFVVSRIKAWQEMGGSLNECAILYRSNAQS
RVLEEALLQQSLPYRIYGGMRFFERQEIKDALAYLRLIANRNDDAAYERVVNTPTRGIGD
RTLEVVRQAARDRQLTLWQATRALLQEKALAGRAAGALQRFLELVDALANDTAEQPLHVQ
TDRVIKDSGLWSMYEQEKGEKGQTRIENLEELVTATRQYSYQEEDQDLMPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLEEGGRLEEERRLAY
VGVTRAMRKLTMTYAETRRLYGKEVYHRPSRFIGELPQECVEEVRLRASVSRPVNQQRLG
TPISESDSGYKLGQRVRHAKFGEGTIVNLEGGGDHCRVQVAFPGQGIKWLVAAYAKLDIV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatctgatctgctcgacagcctgaacgataaacaacgcgacgccgtcgcggct
ccccgcagcaacatgttggtgctggccggggctggcagcggcaagacgcgggtgctggtg
catcgtatcgcctggctgatgtcggtggagaactgctccccgtactccatcatggcggtg
acgttcaccaataaagccgccgcagagatgcgccatcgaatcgaacagttgatcggcacc
agtcagggcggcatgtggatcggcacttttcacggtctggcgcatcggctgctgcgcgcg
catcatcttgatgccggactgccgcaggactttcagattttggacagcgaagaccagctc
cgtctgctcaaacggctggtcaaagcgctcaatctggacgagaagcagtggccgccgcgg
caggcgatgtggtacatcaacggcaaaaaagacgagggcctgcgtcctcagcatatcgaa
agctacggcaatccggtggagcaaacctggctccgcgtgtatcaggcctatcaggaagcc
tgcgatcgcgccggactggtggatttcgccgaactgctgctgcgtgcccatgaattgtgg
ctgaacaagccgcacattctgcagcactaccgggatcgctttaacaacattctggtcgac
gaattccaggacactaaccgcattcagtacgcctgggtgcgtatgctggcaggcgacagc
gcccgggtcatgattgtgggtgacgatgaccagtctatctacggctggcgcggggcgcag
gtcgaaaatattcagcacttcctgaacgatttcccgcaggcttccaccatccgtctggag
cagaactaccgttccagcgccaatatcctcaacgcggccaatgccctgatcgcccataac
ggcgatcgtctggggaaaaatttgtggaccgacggcgtcgaaggcgacccgatttccctg
tactgcgcgttcaacgaactggacgaggcgcggtttgtcgtcagccgcatcaaggcgtgg
caggaaatgggcggcagcctgaacgagtgcgccattctttaccgcagcaacgcccaatcc
cgtgtgctggaagaggcgctgctacagcaaagtctgccttatcgcatttatggcggaatg
cgcttcttcgaacgacaggaaatcaaagacgcgctggcctacctgcggctgatcgccaac
cgtaacgacgatgcggcgtatgaacgcgtggtgaataccccgacgcgcggcatcggagac
cggacgctggaagtggtgcgtcaggccgcgcgcgaccgtcagctgactctgtggcaggcc
acgcgtgcgttgttgcaggagaaggcgctggccggacgcgccgccggtgcgctacagcgc
ttcctcgaactggtggacgcgttggccaacgataccgccgagcagccgctgcacgtacaa
actgaccgcgtgatcaaagactccggcctgtggagcatgtatgaacaggaaaaaggcgag
aagggccagacccgcatcgagaacctggaggaactggtcaccgcgacgcgccagtacagc
tatcaggaagaagatcaggatctgatgccgctgcaggcgtttctgtctcatgcggcgctg
gaagccggagaagggcaggcggatgcctatcaggatgcggtccagctgatgacgctgcat
tccgctaaagggctggagttccctcaggtcttcatcgttgggatggaggaaggcatgttc
ccaagccagatgtctctcgaagagggcgggcgactggaggaagagcgccgactggcgtat
gtcggggtgacccgtgcgatgcgtaaactgacgatgacctacgcggaaactcgccgtttg
tacggcaaagaggtttaccaccgcccgtcgcgtttcattggcgaactgccgcaggagtgc
gtggaggaagtccgactgcgcgccagcgtgtcgcggcccgttaatcagcagcggctagga
acgccgatttccgagagcgacagcggctacaagctggggcagcgcgtgcgtcatgccaag
ttcggcgaagggaccattgtcaatcttgaaggcggcggcgaccattgccgcgttcaggtg
gccttccccggtcaggggataaaatggctggtggcggcttacgcaaagctggatatcgta
taa
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