Lonsdalea britannica: CKQ53_05875
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Entry
CKQ53_05875 CDS
T05623
Symbol
rfaQ
Name
(GenBank) putative lipopolysaccharide heptosyltransferase III
KO
K02849
lipopolysaccharide heptosyltransferase III [EC:
2.4.99.25
]
Organism
lbq
Lonsdalea britannica
Pathway
lbq00540
Lipopolysaccharide biosynthesis
lbq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lbq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CKQ53_05875 (rfaQ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
lbq01005
]
CKQ53_05875 (rfaQ)
Enzymes [BR:
lbq01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.25 lipopolysaccharide heptosyltransferase III
CKQ53_05875 (rfaQ)
Lipopolysaccharide biosynthesis proteins [BR:
lbq01005
]
Core region
CKQ53_05875 (rfaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
ADH_zinc_N_2
Motif
Other DBs
NCBI-ProteinID:
AXW86567
UniProt:
A0AAD0SER2
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All DBs
Position
complement(1258982..1260049)
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AA seq
355 aa
AA seq
DB search
MNHATAHAVRHILLIKFRHHGDMLLTTPVINTLSQTYPDAQIDVLLYLETQDMLVANPRI
HHIYAIDRQWKKQGLRTQLSKEWQLISQLRHQHYDLVINLADQWRSALIAKLTGAPIRLG
FDFDKRQHLLWRYCHSALASTAPHAHQHTVEQNLSILSPLGISSVSTQVTMGYTAEDWAQ
CQEKLRQQQVDGPYIVVQPTSRWLFKCWSEEKMAAAISALQQDGHTVVVTSGPDAKEQQM
VSNILARCPAEGVISLSGQLTLRQLAALIDHARLFLGVDSVPMHMAAALQTPSIALFGPS
KLHFWRPWQAPGEVIWAGDYGTLPDPDDIDTGTQQRYLDLIPVEAVTAAARRQLS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacgccacagcccatgccgtcaggcatattctgctgataaaatttcgccatcat
ggcgacatgctgttaaccaccccggttatcaacaccctgagtcaaacctatccggatgcc
caaattgatgttctgctgtaccttgaaacgcaggacatgctggtcgccaatccacgcatc
catcatatttacgctatcgatcgccaatggaaaaaacaggggctgcgcacccagctcagc
aaagagtggcagttgatcagccagctgcgtcatcagcattacgatctcgttatcaacctg
gccgatcagtggcgaagcgccttgatagcgaaactcaccggcgcgccgattaggctgggg
ttcgatttcgataaacgtcagcatctgctgtggcgctactgccacagcgctttagccagc
acggcgccgcatgcgcaccagcacaccgtggagcaaaacctctctattctttcgccgctg
gggatttcctccgtcagcacgcaggtcacgatgggctataccgccgaagactgggcgcag
tgtcaggaaaagctgcgacagcagcaggtcgacggcccttacatcgtcgtccagcccacc
tcgcgttggctgttcaagtgctggagcgaagagaagatggcagcggcgatttccgcactg
cagcaggacggacacaccgtcgtcgtgacatccgggccggatgctaaagaacaacagatg
gtctccaatattctcgcccgctgtccggccgagggggtcatctcgctgtcaggtcagctg
acgttgcgccagctggcggcgctcatcgaccacgctcgcctgtttctgggcgttgattcc
gtccccatgcatatggccgccgccctgcaaacgcccagcatcgccctatttggcccttcg
aaacttcatttttggcgtccctggcaggcaccgggagaagtgatctgggccggcgactac
ggcacgctgcccgacccggatgatatcgataccgggacacaacaacgttaccttgacctg
atccccgttgaggcggtcacggccgcggcacggagacaactatcatga
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