KEGG   Lonsdalea britannica: CKQ53_07210
Entry
CKQ53_07210       CDS       T05623                                 
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
lbq  Lonsdalea britannica
Pathway
lbq03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lbq00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CKQ53_07210
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lbq02044]
    CKQ53_07210
Secretion system [BR:lbq02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CKQ53_07210
SSDB
Motif
Pfam: IcmF-related IcmF-related_N IcmF_C IcmF_helical YqhR YniB AAA_18
Other DBs
NCBI-ProteinID: AXW86795
UniProt: A0AAD0WKK2
LinkDB
Position
1542077..1545580
AA seq 1167 aa
MFKTIITFLRQQLPKLKLSWVMLGIVLWIVVLALAWWLGPRLHVFDTRPLDTIWSRIVFT
LLWLWLGFSISAWRLWRRVRHIRAEQQKQKIAEHDPQQIFVDKQQAFLDRWLLALREHLG
AGILYKMPWYLTIGLPGSGKSSLIHRANEANKLNPHLDAELRDFAAGQEVDCWVGESAII
FDPDGQMMAPSNPDLAPVERKHERLWTHLLKWLSENRKRQPLNGLVLTLDLAWLSHASVP
ERKAYAQLIRGRIQEIATTLNTRLPIYVALTKLDMLRGFDIAYRQLDKETRQSILGVTFD
LKGSAGKGWQEELDAFWDKWVSALNDNLPDNMLSNLTSEQRSALFSFTRQLAGLKDYVEE
ILADAITPEEYKPLLVRGVYACSVYQQGVPFDAFAQAATFRYQLPEPVNSALKGESNTFF
VKRLFSGVIFPEAHLAGENRLHSLYRRRRIGIGMGCMGVLAALLVIGWHHYYRLNEEAGR
NVLNKAQAFTDTTELAGQQNQSFGFGQLPRLNLIREATLSFGDYREKTPVLSEMGLYQGD
KIGPFVEGTYLQLLSQRFLPAVMQGLQDDLNQAPKGSEQKLAILRIMRMIDDASGRNKSV
VEQYMGQRWQRAFPGQGKVQEHLMQHLDYALEHTDWHQARQQKDAQAIAAFEPFRMPIAD
AQRELSKLPMFQRIYQSLVTKSVDVLPPDMMMRDEVGPVFDTVFTLRNDKAGAVPRLLTN
AGFSEYFVKQDKTLFDLAALDAWVLGQREKVYLSDEDRREIQRQVNDRYITDYVNQWQKV
LAGLDVQPLETPEQALDVLTAITGNDQPFQRVIAALNDNTRARKLSDNDHDPAQVMNARI
SRTFMTTNSTLSGRGDQVALIQEVNQKLTEFYHSLEQIVNAGDPGQAALKAMQLRQTNRF
ADPAFALQQYARSLPTPLDRWVGQIAEQSSHLVMDLAMSSLNQEWQDKVVTPFNDQLADR
YPFNPESDKDVALSEMERFFAPGGTLDSFYQANLKSILNEGQGSGDVNTTLQTELVKQLE
RADRIRKTLFNAQGGLEVHFVLEPIELTANKRRSVLNLDGQLLEYSHGRRQKTPLVWPNN
MRDGAESKITLVPDNRERSPRSLSYIGPWAMFRLINTGELRQVNDNTFDVQFAVDQGTMS
YRVYTDASHNPFAGGLFSQFQLPESLY
NT seq 3504 nt   +upstreamnt  +downstreamnt
atgtttaaaacaatcattacctttttgcggcaacagctgccgaagctaaagctctcctgg
gtcatgctggggatcgtgctctggattgtcgtgttggcgctggcctggtggcttggcccg
cgactgcatgtattcgacacgcggccgctggatacgatctggtcacgcatcgtcttcacg
ctattgtggctctggctgggtttcagcatcagcgcctggcggctgtggcgtcgcgtacgc
catatccgggcggagcaacaaaaacagaagatcgccgaacacgatcctcaacagatcttc
gtcgacaaacagcaggcgtttctggatcgctggctgctggcgctgcgcgaacatctgggg
gcgggcattctctacaagatgccgtggtacctgacgatcggtctgccgggcagcggtaaa
agcagcctgattcaccgcgccaacgaggcgaacaagctcaacccgcatctggatgccgaa
ctgcgagacttcgccgcgggtcaggaagtggactgctgggtaggcgaaagcgcgattatc
ttcgatcccgatggtcagatgatggcgccgtcgaatcccgatctggcaccggtcgaacgc
aaacatgaacgtctgtggacgcatttgctgaaatggctgagcgaaaatcgtaagcgtcag
ccgctgaacggtctggtgctgacgctggatctggcctggctgtcgcatgccagcgtgccg
gaacgtaaagcctacgcgcagctgatccgcggacgcattcaggaaatcgccaccacgctg
aatacccggctgccgatctatgtcgcgctcaccaagctggatatgctgcgcggctttgac
atcgcctaccgtcagttggataaggaaacgcgtcagtccatcctcggggtgaccttcgat
ctgaaaggcagcgccggtaaaggctggcaggaagagctggatgcgttctgggacaaatgg
gtgtccgcgctgaacgacaatctgcctgacaacatgctctccaatctcaccagcgaacaa
cgcagcgcgctgttcagcttcacgcgtcagctggccgggttgaaagactacgtcgaagag
atccttgccgacgcgattacgccggaagagtacaaaccgctgttggtgcgcggcgtttac
gcgtgttccgtttatcagcagggcgtgccgttcgatgccttcgcgcaggcggcgaccttc
cgctatcagctgccggagccggtcaattccgctctgaaaggcgaatccaacaccttcttc
gtgaaacgcctgttctccggcgtcatcttccccgaagcgcatctggccggggaaaaccgc
ctgcacagcctttatcgccgccgccgtatcggcatcggtatggggtgcatgggcgtactc
gccgcgctgctggtgattggctggcatcactactatcggctgaacgaagaagccgggcgc
aatgtgctgaacaaggcgcaggcgtttacggacaccaccgagctggcgggacagcagaac
caaagcttcggttttggacaactgccgcgtcttaacctgattcgcgaagccacgctgtcg
ttcggtgactatcgcgagaaaacgccggtactgtcggaaatggggctgtatcagggcgat
aagatcggtcctttcgtagaaggcacctatctgcaactcctgagccagcgtttcctgccg
gcggtcatgcagggattgcaggacgatctgaatcaggctcccaaaggcagcgagcagaag
ctggcgatcctgcgcattatgcggatgatcgatgatgcgtccggccgcaacaaatcggtg
gtcgagcagtacatgggacagcgttggcagcgggcgttccccggtcagggcaaggtgcag
gaacatctgatgcagcacctggactatgcgctggagcacaccgactggcatcaggcccgt
cagcagaaagatgcgcaggcgatcgccgccttcgaaccgttccggatgcctatcgccgac
gcgcagcgcgagctgagtaaactgccgatgttccaacgcatctaccagagtttggtgacc
aaatcggtcgacgtgctgccgccggatatgatgatgcgcgatgaagtcgggccggtgttc
gataccgtcttcacgctgcgcaatgacaaagcgggcgcggtgccgcggctgctgaccaat
gcgggcttcagcgaatatttcgtcaaacaggataagacgctgttcgatctggccgcgctg
gatgcgtgggtgctgggccagcgtgagaaagtctatctgagcgacgaagaccgcagggag
atccagcgtcaggtcaacgatcgctatatcaccgactacgtcaaccagtggcagaaagtg
ctggcgggtctggacgtgcagccgctggaaacgccggagcaggcgctggatgtgctgacg
gccatcaccggtaacgatcagcctttccaacgcgtgatcgcggcactgaacgacaatacc
cgcgcccgcaagctgtcggataacgaccacgatccggcgcaggtcatgaatgcgcgtatt
agccgtacgtttatgactaccaactcgacgttgagcggtcgtggcgatcaggtcgccttg
atccaggaagtgaatcagaagctgacggagttctaccacagtctggagcagatcgtgaat
gcgggcgatccgggtcaggcggcgctcaaggcgatgcagctgcgtcagaccaaccgcttc
gccgatccggccttcgctctgcaacagtacgcgcgcagcctgccgacgccgctggatcgc
tgggtcgggcagatcgccgagcagagttcgcatctggtgatggatctggcgatgtcttcg
ctgaatcaggaatggcaggacaaagtggtgacgccgttcaacgatcagctggcggatcgc
tacccgttcaatcctgagtccgacaaggatgtggcgctgtcggaaatggagcgcttcttt
gctcccggcggcacgctggacagcttctatcaggctaacctgaagtccatcctgaacgaa
ggacagggaagcggcgacgtgaacacgaccttgcagaccgagctggtcaagcagttggag
cgcgccgatcgcatccgcaaaaccctgttcaatgcgcagggcgggctggaggtgcacttc
gtgctggagcctatcgagttgaccgcgaacaaacgtcgcagcgtactgaatctcgacgga
cagctgttggagtactcccacggccgtcgtcagaaaacgccgctggtctggccgaacaac
atgcgcgacggtgcggaaagcaaaatcacgctggtgccggacaaccgcgaacgttcgcct
cgtagcctgagctatatcggaccgtgggcgatgttccgcctgatcaatacgggcgagttg
aggcaggtcaacgacaacacgttcgacgtgcagttcgccgtcgatcagggaacgatgtcc
tatcgcgtttacaccgacgccagccataacccgttcgccggtggtctgttcagccagttc
caactgcctgaatcactgtattaa

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