Lonsdalea britannica: CKQ53_07315
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Entry
CKQ53_07315 CDS
T05623
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lbq
Lonsdalea britannica
Brite
KEGG Orthology (KO) [BR:
lbq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbq03400
]
CKQ53_07315
DNA repair and recombination proteins [BR:
lbq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CKQ53_07315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
DUF7125
Lon_C
GvpD_P-loop
ABC_tran
RecA_N
AAA_22
SLFN-g3_helicase
Rad51
AAA_14
AAA_16
nSTAND_NTPase5
NTPase_1
nSTAND3
AAA
AAA_24
cobW
AAA_5
Zeta_toxin
AAA_29
Viral_helicase1
Herpes_Helicase
Zn_ribbon_Thio2
PAXNEB
DZR
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AXW86813
UniProt:
A0AAD0SKL3
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All DBs
Position
complement(1568356..1569741)
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AA seq
461 aa
AA seq
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MAKAAKRAFVCNECGADYPRWQGQCSACQAWNTITEVRLAAAPSSARSDRFASYAGDSAG
VSKVQKLSDISLEALPRFSTGFQEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKL
SEQMKTLYVTGEESLQQVAMRAHRLGLPAQNLNMLSETSIEQICLIAEQEQPKLMVIDSI
QVMHLSDIQSSPGSVSQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDC
SVLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREISNPSAIFLSRGDEITSGSS
VMVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMSDQDVF
VNVVGGVKVTETSADLALLLSLVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERITEA
AKHGFKRAIVPFANMPKKPPANMQVFGVKKLADALAILDDL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaagccgctaaacgcgcctttgtctgcaatgagtgcggcgctgattatccgcgc
tggcaggggcaatgcagcgcctgccaggcctggaataccatcacggaagtccgtctggcg
gccgcgccgtcgtcagcacgcagcgaccgcttcgccagctatgcgggcgacagcgccggg
gtcagcaaggtacagaaactgtcggacatcagcctcgaagcgcttcctcgcttctccacc
ggctttcaggagttcgaccgggtgctgggcggcggcgtcgtgcccggcagcgccattttg
atcggcggcaaccccggtgccggtaaaagtaccctactgctgcaaacgctgtgcaaactg
tccgaacagatgaaaaccctgtacgtgacgggcgaagagtcgttgcagcaggtcgcgatg
cgcgcgcaccggctcggccttcccgcccagaatctcaacatgctgtcggaaaccagcatt
gagcagatctgcctgatcgccgagcaggaacagccgaagctgatggtaatcgactccatt
caggtgatgcacctgtccgatattcagtcctcgccgggcagcgtgtctcaggtgcgtgaa
accgccgcctatttgacccgcttcgccaaaacccgcggagtggctatcgtgatggtcggc
cacgtcaccaaagatgggtcgctggcggggccaaaggtgctggagcactgcattgactgt
tccgtgctgctggacggcgacgcggactctcgtttccgcacgctgcgcagccataaaaac
cgttttggcgccgtcaatgagctgggcgttttcgccatgacggagcagggtctgcgtgaa
atcagcaatccatcggccattttcctgagccgaggcgatgagatcacttccggcagttcg
gtgatggtggtatgggaaggcacgcggccgctgctggtggaaattcaggcgctggtggat
cactccatgatggccaatccccggcgggtggcggtcggactggagcagaatcgcctggcg
atcctgctggcggtactgcatcgccacggcggcctgcagatgtccgatcaagacgtgttc
gtcaacgtggtgggcggcgtaaaagtgacggaaaccagcgccgatctggcgctgctgctg
tcgctggtctccagcctgcgcgatcgcccgctgccgcaggatctggtggtcttcggcgag
gtcggtttggcgggcgagatcaggccggtgccgagcggacaagagcggatcaccgaagcg
gccaaacatggcttcaagcgtgcaatcgtccccttcgccaacatgcccaagaagccgcca
gccaacatgcaggtgttcggcgttaagaagctggcggacgcgctcgccattctggatgat
ctgtaa
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