Lonsdalea britannica: CKQ53_07955
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Entry
CKQ53_07955 CDS
T05623
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lbq
Lonsdalea britannica
Pathway
lbq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CKQ53_07955 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbq03019
]
CKQ53_07955 (pnp)
03016 Transfer RNA biogenesis [BR:
lbq03016
]
CKQ53_07955 (pnp)
Enzymes [BR:
lbq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CKQ53_07955 (pnp)
Messenger RNA biogenesis [BR:
lbq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CKQ53_07955 (pnp)
Transfer RNA biogenesis [BR:
lbq03016
]
Prokaryotic type
tRNA degradation factors
CKQ53_07955 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
KH_2
OB_RRP5_4th
aRib
S1_RRP5
KH-I_KHDC4-BBP
KH_SLS1_2
UPF0181
DUF4172
Motif
Other DBs
NCBI-ProteinID:
AXW86922
UniProt:
A0AAD0SFF0
LinkDB
All DBs
Position
1698349..1700469
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AA seq
706 aa
AA seq
DB search
MLNPIIRKFQYGQHTVTIETGMMARQATAAVMVSMDDTAVFVTVVGAKQPKPGQGFFPLT
VNYQERTYAAGRFPGGFFRREGRPSEGETLISRLIDRPIRPLFPEGFLNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGCARVGYINDQYVLNPTTDELKESRLDLVVA
GTEGAVLMVESEADLLSEDQMLGAVVFGHEQQQIVIENINSLVAEAGKPKWEWHAPEVNE
TLYSRVKALSESRLGDAYRITEKQERYAQVDVIKADVVAALLAEDETLDEGEISDILGSI
EKNVVRSRVLSGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTER
DAQTIDELTGERTDRFLLHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPKASE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGENFVVLSD
ILGDEDHLGDMDFKVAGSRDGVTALQMDIKIEGITREIMQVALNQAKGARLHILGVMEEA
ISTPRGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAST
DGEKAKHAIRRIEEITAEIEVGRIYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLEMGQEVPVKVLEVDRQGRVRLSMKEATPQSQEPAVTSGEE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgattatccgtaaattccaatatggtcagcataccgtcactatcgaaacc
ggtatgatggctcgtcaggctacggcagccgttatggttagcatggacgacaccgcggta
ttcgttaccgttgttggtgctaaacagcctaagccgggtcagggctttttcccgctgacc
gtcaactatcaggagcgtacctacgctgctggtcgtttcccgggtggcttcttccgtcgt
gaaggccgtccgagcgaaggcgaaacattaatttctcgcctgatcgaccgtcctatccgt
ccgctgttcccggaaggtttcctgaatgaagttcaggttatcgctacggttgtttccgtg
aaccctcaggttaacccggatatcgttgctatgatcggcgcatctgctgcgctgagcctg
tctggcattccgttcaacggcccgatcggctgtgctcgcgtggggtatatcaacgaccag
tacgtgctgaacccaaccactgatgagctgaaagaaagccgtttggatctggttgtcgcc
ggtacggaaggcgcggtgctgatggtggaatcagaagcagacctgctgagcgaagatcag
atgctgggcgcggttgtttttggtcatgaacagcagcagattgtcattgaaaacattaat
tctctggttgctgaagcaggcaagccgaagtgggaatggcatgcgccggaagtgaacgaa
acgctgtacagccgtgttaaagcgctgtccgaatcccgtctgggtgacgcttaccgcatc
actgagaagcaggaacgttacgctcaggttgacgtcatcaaagctgatgtcgttgccgcg
ttgctggccgaagatgaaacgctggatgaaggtgaaatcagcgacatcctgggtagcatc
gagaaaaatgtcgttcgtagccgtgttctgagtggcgaaccgcgtatcgatggtcgtgaa
aaagacatgatccgtggcctggacgttcgcaccggcgttctgccgcgcacgcatggctcc
gcactgttcactcgtggtgaaactcaggcgttggtcaccgccacgctgggtactgaacgc
gatgcgcagacgattgacgaactgaccggcgagcgtactgaccgcttcctgctacactat
aacttccctccgtactctgtgggtgaaacaggtatggtcggatcgccgaaacgtcgtgaa
attggtcacggtcgtctggcgaaacgcggcgtgttggctgttatgccgaaagcgagcgaa
ttcccatataccgttcgtgtggtttctgaaatcactgaatccaacggttcttcatccatg
gcttccgtgtgtggcgcttctcttgcgctgatggatgccggtgtgccgatcaaagcggcc
gtcgccggtatcgcgatgggtctggtgaaagaaggcgaaaacttcgtcgtcctgtccgat
attctgggcgatgaagatcaccttggcgacatggatttcaaagtggctggtagccgtgat
ggcgtgaccgcgctgcagatggatatcaagattgaaggtatcacccgcgaaatcatgcag
gtggctctgaaccaggctaaaggcgcgcgtttgcacatcctgggcgtgatggaagaggcg
atcagcacgccgcgtggcgatatctctgaattcgctccgcgtattcataccatcaaaatc
agcaccgacaagatcaaagacgttatcggtaaaggcggctcggttatccgtgctctgacc
gaagagaccggtacgacgatcgaaatcgaagatgatggtacggtgaagattgcttctacc
gacggcgagaaagcgaaacatgctattcgtcgtatcgaagagatcaccgcggaaatcgaa
gtcggccgtatctatcagggcaaagtgactcgtatcgttgacttcggcgcgtttgttgcc
atcggcggcggtaaagaaggtctggttcacatttctcagatcgccgacaagcgtgttgag
aaagtgactgattatctggaaatgggtcaagaagttcctgttaaggttctggaagtcgac
cgtcagggtcgtgtccgtctgagcatgaaggaagcgacgcctcagtctcaggaacctgcg
gtaacctccggcgaagaataa
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