Lonsdalea britannica: CKQ53_08040
Help
Entry
CKQ53_08040 CDS
T05623
Name
(GenBank) RNA polymerase subunit sigma-24
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
lbq
Lonsdalea britannica
Pathway
lbq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lbq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CKQ53_08040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbq03021
]
CKQ53_08040
Transcription machinery [BR:
lbq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CKQ53_08040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
HTH_23
Sigma70_ECF
HTH_28
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
AXW86939
UniProt:
A0AAD0SFJ7
LinkDB
All DBs
Position
complement(1720223..1720765)
Genome browser
AA seq
180 aa
AA seq
DB search
MSAVNVPTTPDFCQLYQQHHGWLQSLLRKRLGNRCDASDLAQDVFLQLLMKPREFDSHHG
TRAYLSVMAQGMCVDLWRRKALEQAWLESLQHHAADASLSAEQSSIVLETLFQVDGMLRH
LPEKTRSAFVMSQIQGMTYAQIASVLNVSERMVKKYMTQAMLHCILLETESDAEPPTRSR
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggttaacgtaccgaccacgcctgatttttgtcagctctaccagcagcaccac
ggctggttgcagagcttgctgcgtaaacgcctgggaaaccggtgcgacgcatccgatctg
gcgcaggacgtttttctacagttactgatgaaacctcgcgagttcgacagccaccacggc
acccgcgcttatctcagcgttatggcgcagggaatgtgcgtcgatctttggcgacgcaag
gcgctggaacaggcctggctggagtcgctacaacaccatgcggcggatgcctccctgtcg
gccgaacagagctccatcgtgctggaaacgttgtttcaagtggacggcatgctgcgacat
ctcccggaaaaaacgcgctcggcgtttgtgatgtcgcaaattcaggggatgacctatgcg
cagatcgcttcggtgctcaacgtgtctgaacgtatggtgaaaaagtatatgacgcaggcc
atgctgcactgcattcttctcgaaacagaatccgacgccgaaccgccgacccggtcccgc
taa
DBGET
integrated database retrieval system