Lonsdalea britannica: CKQ53_09060
Help
Entry
CKQ53_09060 CDS
T05623
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lbq
Lonsdalea britannica
Pathway
lbq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CKQ53_09060 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbq03400
]
CKQ53_09060 (recD)
Enzymes [BR:
lbq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CKQ53_09060 (recD)
DNA repair and recombination proteins [BR:
lbq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CKQ53_09060 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
Helicase_RecD
Viral_helicase1
AAA_11
SH3_13
UvrD-helicase
AAA_22
SLFN-g3_helicase
AAA_16
nSTAND3
DEAD
AAA_28
PhoH
CbiA
T2SSE
UvrD_C
DUF6511
MukB
TrwB_AAD_bind
DUF87
ATPase
Motif
Other DBs
NCBI-ProteinID:
AXW88799
UniProt:
A0AAD0SJ97
LinkDB
All DBs
Position
1989381..1991243
Genome browser
AA seq
620 aa
AA seq
DB search
MIELLEEARQRRWLRPLDVQFARMLADDDQPYLLLAAACLSAYVGAGHVCLPLSQLHPNA
LFDGRDRALAQEIWQRLGKPDEGEWRQRLLNEPAVGEGEDPAPLVFQQDNLYLQRSWQGE
CRVAQFIAGNRAEPVYDEARIRVVLDGLFPAVEGEADWQKIAAAVALTRRIAVISGGPGT
GKTTTVARLLAALIELQDGPSPRIQLAAPTGKAAARLTESLGSVLSQLPLSDAQRMAFPQ
EATTLHRLLGAVPDSQRLRYHQDNPLHLDVLVVDEASMVDLPMMANLIAALPPQARIILL
GDRDQLASVEAGAVLGDICRFAEQGYSQKRGLQLNRLTGCTLEPGSAENASVADSICLLR
KSYRFTADSGIGQFAKAVNRGDEAQLQAILQHGYDDIVCLPLADNADYQRLLDQAVDGYT
DYLQRIHRGDAPEQVLRAFQRYRQLCALREGPFGVAGLNQRIERALQVAGLIQRPTLNGG
RWYVGRPVMVERNDAVLGLFNGDIGISMTNEQGELRVYFQLPDGRTKSVAPSRLPPHETA
YAMTVHKSQGSEFEHTSLALPNHFLPVLTRELVYTAITRARQRLSLFSDSAILCRAVSTP
TQRYSGLEARIRSLMVESSG
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgattgaactgttggaagaagcgcgtcagcggcgttggttgcgtccgctggacgtgcag
tttgcccggatgctggcggacgacgaccagccgtatctcctgctggcggcggcgtgcctc
agcgcctacgtgggcgcggggcacgtttgtctgccgctgtcacagcttcatcctaacgcc
ttgtttgacggtcgggatcgggcgctggctcaggaaatctggcagcggttagggaaaccg
gatgaaggtgaatggcgacagcggttgttgaacgaacccgccgtcggcgagggtgaagat
cctgccccgctggtttttcagcaggacaatctgtacctgcagcgcagctggcagggagag
tgccgagtcgcgcagtttatcgccggtaatcgtgccgagcctgtctatgacgaagcccgt
atccgcgtggtgttggatggcctgtttcctgcggtggagggcgaagccgactggcaaaag
atcgcagcggcggtcgcactgacccggcgaattgcggtgatttcaggagggccgggtacc
ggtaaaacgacgacggtcgccagactgctggcggcgctgatagaactgcaggatgggccg
tcgccgcgtattcagctggcggcgcccactggaaaagccgccgcgcgtctcaccgaatcg
ttgggcagcgtgttaagccagctgccgctcagcgacgctcagcgaatggcttttccgcag
gaagctaccacgctgcaccgcctgttgggggcggtgccggacagccagcgtctgcgctac
catcaggataatccgctgcatttggatgtcctggtggtggacgaagcctcgatggtcgat
cttccgatgatggcgaatctgatcgccgcgctgccgccgcaggcccgcatcatcctgttg
ggcgaccgcgaccagctggcttcggtcgaggccggggcggtgctgggcgacatctgtcgc
ttcgccgaacagggctatagccagaagcgcggtctgcagctgaatcgccttaccggttgc
acgttagaaccgggctcggcggaaaatgcctcggtggctgacagcatttgtctgctgcgc
aagagttaccgtttcacagcggactcgggcattggtcagttcgcgaaggcggtcaaccgg
ggcgacgaagcacagctacaggctattttgcagcacgggtatgacgatatcgtctgtctg
cctctggcggataacgcagactatcagcgcctgttggatcaggcggtggacgggtacacg
gattatcttcagcgtattcatcgcggtgatgctccggagcaagtactgcgagcttttcaa
cgttaccgacagctgtgtgcgctacgagaggggccgtttggcgtcgccggactgaatcag
aggattgaacgcgcattgcaggtggcgggactgattcaacggcccacgcttaatggcggg
cgctggtatgtcggccgtccggtaatggttgagcgaaacgacgcggtgctggggctattc
aacggcgacattggcattagtatgacgaacgaacaaggggagctgcgggtctatttccaa
ctgccggatggtcgaaccaaatcggtcgcgcctagccgtctgccgccgcatgaaacggcc
tatgctatgacggtgcataagtctcaaggctccgagttcgaacacacgtcgctggcgctg
ccgaatcactttctacccgtcttgacgcgtgagttggtgtacaccgcgatcactcgcgct
cgacagcgtctgtcgcttttcagcgatagcgcaatattgtgtcgggcggtgagtacgccg
acgcagcgctatagcggacttgaggcgcgtattcgatctttgatggtggagtcgtcgggt
taa
DBGET
integrated database retrieval system
